Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rnft1Q9DCN7 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Rnft1Q9DCN7 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rnft1Q9DCN7 Gm42721-201ENSMUST00000197165 1523 ntBASIC5.53□□□□□ -1.52
Rnft1Q9DCN7 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.53□□□□□ -1.52
Rnft1Q9DCN7 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.53□□□□□ -1.52
Rnft1Q9DCN7 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Rnft1Q9DCN7 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm26300-201ENSMUST00000102282 94 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm12889-201ENSMUST00000118684 241 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Mir1900-201ENSMUST00000122714 78 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm28997-201ENSMUST00000188759 429 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm18855-201ENSMUST00000206689 570 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm18228-201ENSMUST00000217297 1091 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm7042-201ENSMUST00000223027 384 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 CT572983.1-201ENSMUST00000226895 514 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm8256-203ENSMUST00000228692 591 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.52□□□□□ -1.53
Rnft1Q9DCN7 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm24272-201ENSMUST00000102329 98 ntBASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC5.51□□□□□ -1.53
Rnft1Q9DCN7 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms