Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 Gm38212-201ENSMUST00000194081 2756 ntBASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ddx56Q9D0R4 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.96□□□□□ -1.45
Ddx56Q9D0R4 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.96□□□□□ -1.45
Ddx56Q9D0R4 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.96□□□□□ -1.45
Ddx56Q9D0R4 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Ddx56Q9D0R4 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ddx56Q9D0R4 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.96□□□□□ -1.45
Ddx56Q9D0R4 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Ddx56Q9D0R4 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.96□□□□□ -1.45
Ddx56Q9D0R4 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ddx56Q9D0R4 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Ddx56Q9D0R4 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Mir147-201ENSMUST00000102354 79 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm16394-201ENSMUST00000117289 675 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm8545-201ENSMUST00000120692 801 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm22985-201ENSMUST00000122754 116 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm24687-201ENSMUST00000157758 241 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm23408-201ENSMUST00000158523 265 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm20574-201ENSMUST00000182867 917 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm28996-201ENSMUST00000190316 721 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm29664-201ENSMUST00000191125 463 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm8939-201ENSMUST00000192577 964 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm38185-201ENSMUST00000193195 694 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm44058-201ENSMUST00000204335 467 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm7890-201ENSMUST00000204877 601 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ddx56Q9D0R4 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm22372-201ENSMUST00000104589 136 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm13473-201ENSMUST00000119289 367 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm11881-201ENSMUST00000119408 572 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm14927-201ENSMUST00000120283 454 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm5405-201ENSMUST00000120478 609 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm14979-201ENSMUST00000121561 1035 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm15116-201ENSMUST00000122248 663 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm22261-201ENSMUST00000158691 324 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm6472-201ENSMUST00000178147 651 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 135.5 ms