Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim63Q38HM4 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Trim63Q38HM4 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim63Q38HM4 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm25167-201ENSMUST00000104188 120 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm25498-201ENSMUST00000104424 129 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm12568-201ENSMUST00000117362 624 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm14729-201ENSMUST00000118373 689 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm12331-201ENSMUST00000119927 622 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm16511-201ENSMUST00000120019 564 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm12903-201ENSMUST00000121015 544 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm12321-201ENSMUST00000121485 804 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm12451-201ENSMUST00000121636 633 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm23781-201ENSMUST00000157940 308 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm25433-201ENSMUST00000158283 286 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Zfp950-206ENSMUST00000178819 171 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm5261-201ENSMUST00000185860 713 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm28552-201ENSMUST00000190725 388 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm412-201ENSMUST00000193360 948 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm42887-201ENSMUST00000202469 1119 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm44371-201ENSMUST00000204148 467 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm32300-201ENSMUST00000221735 515 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim63Q38HM4 AC162183.1-201ENSMUST00000224843 472 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm24451-201ENSMUST00000083353 133 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Mir421-201ENSMUST00000083575 76 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Mir196a-1-201ENSMUST00000083612 102 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm44209-201ENSMUST00000204556 4153 ntBASIC4.78□□□□□ -1.64
Trim63Q38HM4 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Trim63Q38HM4 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim63Q38HM4 Gm13928-201ENSMUST00000120326 1732 ntBASIC4.77□□□□□ -1.65
Trim63Q38HM4 Gm9577-201ENSMUST00000174655 2620 ntBASIC4.77□□□□□ -1.65
Trim63Q38HM4 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim63Q38HM4 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Trim63Q38HM4 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim63Q38HM4 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.77□□□□□ -1.65
Trim63Q38HM4 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Trim63Q38HM4 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim63Q38HM4 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim63Q38HM4 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Trim63Q38HM4 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim63Q38HM4 Gm6913-201ENSMUST00000100019 348 ntBASIC4.77□□□□□ -1.65
Trim63Q38HM4 Mir676-201ENSMUST00000102443 89 ntBASIC4.77□□□□□ -1.65
Trim63Q38HM4 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.77□□□□□ -1.65
Trim63Q38HM4 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Trim63Q38HM4 Gm7146-201ENSMUST00000116079 739 ntBASIC4.77□□□□□ -1.65
Trim63Q38HM4 Mir1192-201ENSMUST00000116976 121 ntBASIC4.77□□□□□ -1.65
Trim63Q38HM4 Gm12636-201ENSMUST00000117395 624 ntBASIC4.77□□□□□ -1.65
Trim63Q38HM4 Gm7129-201ENSMUST00000117402 997 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms