Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm9239-201ENSMUST00000186942 2557 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Gm18066-201ENSMUST00000210904 1774 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col17a1Q07563 Gm37999-201ENSMUST00000195178 1809 ntBASIC7.95□□□□□ -1.14
Col17a1Q07563 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC7.95□□□□□ -1.14
Col17a1Q07563 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col17a1Q07563 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Col17a1Q07563 Gm13503-201ENSMUST00000119017 446 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm15103-201ENSMUST00000119893 871 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm12998-201ENSMUST00000122445 789 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm23789-201ENSMUST00000122536 301 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm26170-201ENSMUST00000158419 148 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm29045-201ENSMUST00000187278 698 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Scgb2b6-201ENSMUST00000188132 330 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm21489-201ENSMUST00000189668 818 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC7.94□□□□□ -1.14
Col17a1Q07563 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Apoo-ps-201ENSMUST00000061241 586 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col17a1Q07563 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col17a1Q07563 AC164567.3-201ENSMUST00000217743 2869 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm42496-201ENSMUST00000197976 3241 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 AC120347.1-201ENSMUST00000223326 1639 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col17a1Q07563 AC130661.1-201ENSMUST00000218248 1680 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col17a1Q07563 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm45697-201ENSMUST00000212893 2876 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col17a1Q07563 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col17a1Q07563 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col17a1Q07563 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col17a1Q07563 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col17a1Q07563 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col17a1Q07563 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col17a1Q07563 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm11278-201ENSMUST00000121002 997 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm13363-201ENSMUST00000122008 522 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm16411-201ENSMUST00000122164 1100 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col17a1Q07563 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm8941-201ENSMUST00000181451 899 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col17a1Q07563 AL645522.1-201ENSMUST00000197692 104 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm43093-201ENSMUST00000202439 1213 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 AC122305.2-201ENSMUST00000215148 834 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC7.94□□□□□ -1.14
Col17a1Q07563 AC154592.1-201ENSMUST00000225784 574 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col17a1Q07563 Gm22868-201ENSMUST00000083955 164 ntBASIC7.94□□□□□ -1.14
Col17a1Q07563 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC7.93□□□□□ -1.14
Col17a1Q07563 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Col17a1Q07563 AC122263.1-201ENSMUST00000228636 2805 ntBASIC7.93□□□□□ -1.14
Col17a1Q07563 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Col17a1Q07563 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Col17a1Q07563 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Col17a1Q07563 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Col17a1Q07563 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col17a1Q07563 Gm15394-201ENSMUST00000119656 1308 ntBASIC7.93□□□□□ -1.14
Col17a1Q07563 Gm43341-201ENSMUST00000200104 1308 ntBASIC7.93□□□□□ -1.14
Col17a1Q07563 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col17a1Q07563 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC7.93□□□□□ -1.14
Col17a1Q07563 Gm13341-201ENSMUST00000120780 672 ntBASIC7.93□□□□□ -1.14
Col17a1Q07563 Gm5392-201ENSMUST00000122189 789 ntBASIC7.93□□□□□ -1.14
Col17a1Q07563 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col17a1Q07563 Gm23046-201ENSMUST00000158369 284 ntBASIC7.93□□□□□ -1.14
Col17a1Q07563 Gm25971-201ENSMUST00000158953 286 ntBASIC7.93□□□□□ -1.14
Col17a1Q07563 Gm22569-201ENSMUST00000175545 124 ntBASIC7.93□□□□□ -1.14
Col17a1Q07563 Mir6412-201ENSMUST00000184477 97 ntBASIC7.93□□□□□ -1.14
Col17a1Q07563 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
Col17a1Q07563 Gm5285-201ENSMUST00000193089 666 ntBASIC7.93□□□□□ -1.14
Col17a1Q07563 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC7.93□□□□□ -1.14
Col17a1Q07563 Gm45078-201ENSMUST00000205343 546 ntBASIC7.93□□□□□ -1.14
Col17a1Q07563 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC7.93□□□□□ -1.14
Col17a1Q07563 AC123062.1-201ENSMUST00000221287 481 ntBASIC7.93□□□□□ -1.14
Col17a1Q07563 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col17a1Q07563 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Col17a1Q07563 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Col17a1Q07563 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Col17a1Q07563 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Col17a1Q07563 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col17a1Q07563 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col17a1Q07563 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col17a1Q07563 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col17a1Q07563 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col17a1Q07563 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC7.92□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms