Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SgcbP82349 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
SgcbP82349 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SgcbP82349 Gm15988-201ENSMUST00000118677 367 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Gm11445-201ENSMUST00000119101 532 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Gm12929-201ENSMUST00000122406 370 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC5.82□□□□□ -1.48
SgcbP82349 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Gm25660-201ENSMUST00000158470 104 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Gm9071-201ENSMUST00000165915 474 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Mir6348-201ENSMUST00000183804 120 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.82□□□□□ -1.48
SgcbP82349 Gm2077-201ENSMUST00000195017 319 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Gm43048-201ENSMUST00000196101 388 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC5.82□□□□□ -1.48
SgcbP82349 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC5.82□□□□□ -1.48
SgcbP82349 Gm43157-201ENSMUST00000198223 412 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SgcbP82349 Gm43406-201ENSMUST00000200356 334 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC5.82□□□□□ -1.48
SgcbP82349 Gm19140-201ENSMUST00000209790 421 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Gm45530-201ENSMUST00000211658 225 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Gm3442-201ENSMUST00000216808 710 ntBASIC5.82□□□□□ -1.48
SgcbP82349 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Gm5928-201ENSMUST00000221839 466 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 AC167140.1-201ENSMUST00000224710 403 ntBASIC5.82□□□□□ -1.48
SgcbP82349 AC138718.1-201ENSMUST00000225947 1009 ntBASIC5.82□□□□□ -1.48
SgcbP82349 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.82□□□□□ -1.48
SgcbP82349 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.82□□□□□ -1.48
SgcbP82349 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SgcbP82349 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SgcbP82349 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Gm24460-201ENSMUST00000082731 106 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Gm24928-201ENSMUST00000083399 107 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Gm25897-201ENSMUST00000083709 107 ntBASIC5.82□□□□□ -1.48
SgcbP82349 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC5.82□□□□□ -1.48
SgcbP82349 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Gm43421-201ENSMUST00000200044 2905 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SgcbP82349 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SgcbP82349 Gm44708-201ENSMUST00000205580 2237 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SgcbP82349 Gm37685-201ENSMUST00000193507 2177 ntBASIC5.82□□□□□ -1.48
SgcbP82349 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SgcbP82349 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SgcbP82349 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SgcbP82349 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SgcbP82349 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SgcbP82349 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SgcbP82349 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
SgcbP82349 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SgcbP82349 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SgcbP82349 Rnu11-201ENSMUST00000104135 134 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Gm25563-201ENSMUST00000104603 74 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SgcbP82349 Gm26156-201ENSMUST00000116999 123 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Gm14513-201ENSMUST00000117403 123 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Gm12935-201ENSMUST00000119352 246 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Gm14038-201ENSMUST00000121500 807 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Gm13409-201ENSMUST00000122072 546 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.81□□□□□ -1.48
SgcbP82349 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.81□□□□□ -1.48
SgcbP82349 Gm20491-201ENSMUST00000173765 1241 ntBASIC5.81□□□□□ -1.48
SgcbP82349 n-R5s109-201ENSMUST00000179195 119 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.81□□□□□ -1.48
SgcbP82349 Gm27970-201ENSMUST00000184854 407 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC5.81□□□□□ -1.48
SgcbP82349 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
SgcbP82349 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Gm29148-201ENSMUST00000188140 336 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.81□□□□□ -1.48
SgcbP82349 Gm33973-201ENSMUST00000195148 534 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Gm29784-201ENSMUST00000196217 406 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Gm43160-201ENSMUST00000196453 421 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Igkv4-83-201ENSMUST00000196933 334 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC5.81□□□□□ -1.48
SgcbP82349 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.81□□□□□ -1.48
SgcbP82349 CT030175.1-201ENSMUST00000220822 408 ntBASIC5.81□□□□□ -1.48
SgcbP82349 Gm7753-201ENSMUST00000221007 867 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms