Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.23□□□□□ -1.57
Msx3P70354 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Msx3P70354 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx3P70354 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Msx3P70354 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
Msx3P70354 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Msx3P70354 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.23□□□□□ -1.57
Msx3P70354 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx3P70354 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx3P70354 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx3P70354 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx3P70354 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx3P70354 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx3P70354 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Msx3P70354 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.23□□□□□ -1.57
Msx3P70354 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx3P70354 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Msx3P70354 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.22□□□□□ -1.57
Msx3P70354 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.22□□□□□ -1.57
Msx3P70354 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Msx3P70354 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC5.22□□□□□ -1.57
Msx3P70354 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.22□□□□□ -1.57
Msx3P70354 Gm14621-201ENSMUST00000117709 689 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Gm12820-201ENSMUST00000119233 342 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Gm16463-201ENSMUST00000120527 721 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Gm11385-201ENSMUST00000121513 570 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Gm7316-201ENSMUST00000165395 445 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Msx3P70354 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Msx3P70354 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC5.22□□□□□ -1.57
Msx3P70354 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC5.22□□□□□ -1.57
Msx3P70354 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.22□□□□□ -1.57
Msx3P70354 Gm27528-201ENSMUST00000183544 205 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Gm27985-201ENSMUST00000185112 378 ntBASIC5.22□□□□□ -1.57
Msx3P70354 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 Gm28429-201ENSMUST00000188521 363 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Gm37934-201ENSMUST00000192902 402 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Gm37421-201ENSMUST00000193088 132 ntBASIC5.22□□□□□ -1.57
Msx3P70354 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 Gm17937-201ENSMUST00000197908 742 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Gm43554-201ENSMUST00000199987 186 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Msx3P70354 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 Gm21112-201ENSMUST00000212224 578 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Gm7760-201ENSMUST00000212265 578 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Gm7807-201ENSMUST00000212475 578 ntBASIC5.22□□□□□ -1.57
Msx3P70354 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.22□□□□□ -1.57
Msx3P70354 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.22□□□□□ -1.57
Msx3P70354 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.22□□□□□ -1.57
Msx3P70354 Gm4012-201ENSMUST00000221504 581 ntBASIC5.22□□□□□ -1.57
Msx3P70354 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.22□□□□□ -1.57
Msx3P70354 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Msx3P70354 Ube2nl-201ENSMUST00000085228 456 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Msx3P70354 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Msx3P70354 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Msx3P70354 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Msx3P70354 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx3P70354 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.22□□□□□ -1.57
Msx3P70354 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.21□□□□□ -1.57
Msx3P70354 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Msx3P70354 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Msx3P70354 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Msx3P70354 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Msx3P70354 Gm11905-201ENSMUST00000117653 678 ntBASIC5.21□□□□□ -1.58
Msx3P70354 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.21□□□□□ -1.58
Msx3P70354 Gm15981-201ENSMUST00000119196 457 ntBASIC5.21□□□□□ -1.58
Msx3P70354 Gm15828-201ENSMUST00000119911 522 ntBASIC5.21□□□□□ -1.58
Msx3P70354 Gm7350-201ENSMUST00000120964 636 ntBASIC5.21□□□□□ -1.58
Msx3P70354 Gm11805-201ENSMUST00000121238 600 ntBASIC5.21□□□□□ -1.58
Msx3P70354 Gm23318-201ENSMUST00000158000 108 ntBASIC5.21□□□□□ -1.58
Msx3P70354 Gm24944-201ENSMUST00000158330 128 ntBASIC5.21□□□□□ -1.58
Msx3P70354 Gm23855-201ENSMUST00000158377 135 ntBASIC5.21□□□□□ -1.58
Msx3P70354 Mir1963-201ENSMUST00000158594 59 ntBASIC5.21□□□□□ -1.58
Msx3P70354 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Msx3P70354 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Msx3P70354 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms