Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 AC165347.1-201ENSMUST00000224089 1025 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Nsa2-203ENSMUST00000225410 974 ntBASIC4.86□□□□□ -1.63
Sox3P53784 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sox3P53784 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sox3P53784 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.86□□□□□ -1.63
Sox3P53784 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sox3P53784 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC4.86□□□□□ -1.63
Sox3P53784 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
Sox3P53784 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
Sox3P53784 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sox3P53784 Gm19035-201ENSMUST00000193299 1742 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Sox3P53784 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Sox3P53784 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Sox3P53784 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Sox3P53784 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Sox3P53784 Gm44144-201ENSMUST00000203683 1960 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Sox3P53784 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC4.85□□□□□ -1.63
Sox3P53784 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sox3P53784 Gm14125-202ENSMUST00000120921 756 ntBASIC4.85□□□□□ -1.63
Sox3P53784 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sox3P53784 Gm15905-201ENSMUST00000137042 298 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sox3P53784 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC4.85□□□□□ -1.63
Sox3P53784 Gm25865-201ENSMUST00000158247 104 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Gm24217-201ENSMUST00000158260 133 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Gm22326-201ENSMUST00000158897 351 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Gm27266-201ENSMUST00000184521 123 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.85□□□□□ -1.63
Sox3P53784 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sox3P53784 Gm38046-201ENSMUST00000192733 550 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Gm37670-201ENSMUST00000193622 229 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Gm37659-201ENSMUST00000194574 111 ntBASIC4.85□□□□□ -1.63
Sox3P53784 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.85□□□□□ -1.63
Sox3P53784 Gm43444-201ENSMUST00000198123 291 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Gm17951-201ENSMUST00000198536 496 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Gm6051-201ENSMUST00000201529 352 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Gm18599-201ENSMUST00000206729 1125 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.85□□□□□ -1.63
Sox3P53784 Gm45610-201ENSMUST00000209227 784 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Gm45574-201ENSMUST00000210921 331 ntBASIC4.85□□□□□ -1.63
Sox3P53784 AC183268.2-201ENSMUST00000214513 446 ntBASIC4.85□□□□□ -1.63
Sox3P53784 AC105169.1-201ENSMUST00000218912 1294 ntBASIC4.85□□□□□ -1.63
Sox3P53784 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sox3P53784 Gm272-201ENSMUST00000222073 919 ntBASIC4.85□□□□□ -1.63
Sox3P53784 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.85□□□□□ -1.63
Sox3P53784 AC154283.1-201ENSMUST00000228417 389 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Sox3P53784 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.85□□□□□ -1.63
Sox3P53784 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Sox3P53784 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Sox3P53784 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Sox3P53784 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Sox3P53784 Smc5-206ENSMUST00000226111 3265 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.85□□□□□ -1.63
Sox3P53784 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Sox3P53784 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Sox3P53784 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Sox3P53784 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sox3P53784 Gm4759-201ENSMUST00000183414 6622 ntBASIC4.84□□□□□ -1.63
Sox3P53784 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC4.84□□□□□ -1.63
Sox3P53784 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Sox3P53784 Gm23193-201ENSMUST00000102427 82 ntBASIC4.84□□□□□ -1.63
Sox3P53784 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Sox3P53784 Gm24170-201ENSMUST00000104124 133 ntBASIC4.84□□□□□ -1.63
Sox3P53784 Gm24350-201ENSMUST00000104163 133 ntBASIC4.84□□□□□ -1.63
Sox3P53784 Gm15981-201ENSMUST00000119196 457 ntBASIC4.84□□□□□ -1.63
Sox3P53784 Gm8430-201ENSMUST00000119780 471 ntBASIC4.84□□□□□ -1.63
Sox3P53784 Gm14908-201ENSMUST00000120930 1286 ntBASIC4.84□□□□□ -1.63
Sox3P53784 Gm15022-201ENSMUST00000122074 746 ntBASIC4.84□□□□□ -1.63
Sox3P53784 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sox3P53784 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC4.84□□□□□ -1.63
Sox3P53784 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sox3P53784 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC4.84□□□□□ -1.63
Sox3P53784 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC4.84□□□□□ -1.63
Sox3P53784 Gm4412-201ENSMUST00000186660 433 ntBASIC4.84□□□□□ -1.63
Sox3P53784 Gm29161-201ENSMUST00000188250 699 ntBASIC4.84□□□□□ -1.63
Sox3P53784 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sox3P53784 Gm37030-201ENSMUST00000194254 295 ntBASIC4.84□□□□□ -1.63
Sox3P53784 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.84□□□□□ -1.63
Sox3P53784 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sox3P53784 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC4.84□□□□□ -1.63
Sox3P53784 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sox3P53784 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.84□□□□□ -1.63
Sox3P53784 AC118230.1-201ENSMUST00000220196 656 ntBASIC4.84□□□□□ -1.63
Sox3P53784 Gm7045-201ENSMUST00000221466 605 ntBASIC4.84□□□□□ -1.63
Sox3P53784 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.84□□□□□ -1.63
Sox3P53784 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.84□□□□□ -1.63
Sox3P53784 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.84□□□□□ -1.63
Sox3P53784 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Sox3P53784 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC4.84□□□□□ -1.63
Sox3P53784 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Sox3P53784 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.84□□□□□ -1.63
Sox3P53784 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
Sox3P53784 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
Sox3P53784 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms