Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
Cdx1P18111 Gm45874-201ENSMUST00000212423 346 ntBASIC4.24□□□□□ -1.73
Cdx1P18111 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.24□□□□□ -1.73
Cdx1P18111 AC110381.1-201ENSMUST00000218987 586 ntBASIC4.24□□□□□ -1.73
Cdx1P18111 AC156802.1-201ENSMUST00000223623 579 ntBASIC4.24□□□□□ -1.73
Cdx1P18111 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.24□□□□□ -1.73
Cdx1P18111 AC154562.1-201ENSMUST00000226140 966 ntBASIC4.24□□□□□ -1.73
Cdx1P18111 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.24□□□□□ -1.73
Cdx1P18111 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cdx1P18111 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.24□□□□□ -1.73
Cdx1P18111 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Cdx1P18111 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Cdx1P18111 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Cdx1P18111 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cdx1P18111 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
Cdx1P18111 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Cdx1P18111 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Cdx1P18111 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cdx1P18111 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.24□□□□□ -1.73
Cdx1P18111 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.24□□□□□ -1.73
Cdx1P18111 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.24□□□□□ -1.73
Cdx1P18111 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cdx1P18111 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cdx1P18111 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Cdx1P18111 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Cdx1P18111 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Cdx1P18111 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC4.23□□□□□ -1.73
Cdx1P18111 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cdx1P18111 Gm44829-201ENSMUST00000208008 3193 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cdx1P18111 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Cdx1P18111 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cdx1P18111 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cdx1P18111 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 Gm24230-201ENSMUST00000104313 129 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Gm12401-201ENSMUST00000118435 228 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Gm13887-201ENSMUST00000119009 344 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Gm13533-201ENSMUST00000121104 177 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Gm12488-201ENSMUST00000122449 499 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Gm22959-201ENSMUST00000122514 303 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 Gm24216-201ENSMUST00000158259 117 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Gm26170-201ENSMUST00000158419 148 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Gm25906-201ENSMUST00000158489 126 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Gm24675-201ENSMUST00000158757 259 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Cdx1P18111 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Cdx1P18111 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC4.23□□□□□ -1.73
Cdx1P18111 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cdx1P18111 Mir7687-201ENSMUST00000184722 59 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.23□□□□□ -1.73
Cdx1P18111 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC4.23□□□□□ -1.73
Cdx1P18111 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Gm43724-201ENSMUST00000197516 226 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Gm7838-201ENSMUST00000203221 1189 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Gm8039-201ENSMUST00000204758 712 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 AC102287.1-201ENSMUST00000211412 454 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC4.23□□□□□ -1.73
Cdx1P18111 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC4.23□□□□□ -1.73
Cdx1P18111 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Cdx1P18111 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cdx1P18111 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.23□□□□□ -1.73
Cdx1P18111 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Cdx1P18111 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cdx1P18111 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.23□□□□□ -1.73
Cdx1P18111 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC4.23□□□□□ -1.73
Cdx1P18111 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Cdx1P18111 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Cdx1P18111 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Cdx1P18111 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Cdx1P18111 Gm36936-201ENSMUST00000194508 2749 ntBASIC4.23□□□□□ -1.73
Cdx1P18111 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 107.4 ms