Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Lire1P11260 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lire1P11260 Gm42616-201ENSMUST00000198989 4184 ntBASIC5.21□□□□□ -1.58
Lire1P11260 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Lire1P11260 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lire1P11260 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lire1P11260 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.2□□□□□ -1.58
Lire1P11260 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Lire1P11260 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Lire1P11260 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lire1P11260 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lire1P11260 Gm42484-201ENSMUST00000196075 2104 ntBASIC5.2□□□□□ -1.58
Lire1P11260 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lire1P11260 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
Lire1P11260 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lire1P11260 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lire1P11260 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lire1P11260 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Lire1P11260 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lire1P11260 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Lire1P11260 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.2□□□□□ -1.58
Lire1P11260 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
Lire1P11260 Gm14163-201ENSMUST00000117342 217 ntBASIC5.2□□□□□ -1.58
Lire1P11260 Gm14220-201ENSMUST00000118114 449 ntBASIC5.2□□□□□ -1.58
Lire1P11260 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Lire1P11260 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.2□□□□□ -1.58
Lire1P11260 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.2□□□□□ -1.58
Lire1P11260 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Lire1P11260 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.2□□□□□ -1.58
Lire1P11260 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.2□□□□□ -1.58
Lire1P11260 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC5.2□□□□□ -1.58
Lire1P11260 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC5.2□□□□□ -1.58
Lire1P11260 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lire1P11260 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lire1P11260 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Lire1P11260 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Lire1P11260 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Lire1P11260 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lire1P11260 Gm8604-201ENSMUST00000183150 965 ntBASIC5.2□□□□□ -1.58
Lire1P11260 Gm9775-201ENSMUST00000189402 331 ntBASIC5.2□□□□□ -1.58
Lire1P11260 Gm38360-201ENSMUST00000195130 454 ntBASIC5.2□□□□□ -1.58
Lire1P11260 Gm9317-201ENSMUST00000197055 862 ntBASIC5.2□□□□□ -1.58
Lire1P11260 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.2□□□□□ -1.58
Lire1P11260 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC5.2□□□□□ -1.58
Lire1P11260 Gm44432-201ENSMUST00000203342 938 ntBASIC5.2□□□□□ -1.58
Lire1P11260 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Lire1P11260 Gm44773-201ENSMUST00000207374 557 ntBASIC5.2□□□□□ -1.58
Lire1P11260 Gm45874-201ENSMUST00000212423 346 ntBASIC5.2□□□□□ -1.58
Lire1P11260 Gm10709-201ENSMUST00000213318 480 ntBASIC5.2□□□□□ -1.58
Lire1P11260 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.2□□□□□ -1.58
Lire1P11260 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.2□□□□□ -1.58
Lire1P11260 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lire1P11260 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Lire1P11260 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Lire1P11260 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Lire1P11260 Gm25818-201ENSMUST00000083282 164 ntBASIC5.2□□□□□ -1.58
Lire1P11260 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lire1P11260 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Lire1P11260 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Lire1P11260 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.2□□□□□ -1.58
Lire1P11260 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Lire1P11260 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.2□□□□□ -1.58
Lire1P11260 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Lire1P11260 AC101945.4-201ENSMUST00000228464 1976 ntBASIC5.2□□□□□ -1.58
Lire1P11260 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Lire1P11260 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Lire1P11260 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Mir546-201ENSMUST00000102105 121 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm26078-201ENSMUST00000104067 128 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.19□□□□□ -1.58
Lire1P11260 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Gm13770-201ENSMUST00000117149 305 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Gm14106-201ENSMUST00000119382 438 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Gm15019-201ENSMUST00000120148 434 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Gm13531-201ENSMUST00000121893 543 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Gm15840-201ENSMUST00000122099 943 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Mir1970-201ENSMUST00000157839 104 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Gm25439-201ENSMUST00000158280 131 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Gm25606-201ENSMUST00000158363 95 ntBASIC5.19□□□□□ -1.58
Lire1P11260 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm27887-201ENSMUST00000184367 102 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Gm42961-201ENSMUST00000202023 181 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms