Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col1a1P11087 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col1a1P11087 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col1a1P11087 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col1a1P11087 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
Col1a1P11087 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col1a1P11087 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
Col1a1P11087 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Col1a1P11087 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col1a1P11087 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col1a1P11087 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col1a1P11087 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.71□□□□□ -1.5
Col1a1P11087 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col1a1P11087 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col1a1P11087 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col1a1P11087 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Col1a1P11087 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Col1a1P11087 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col1a1P11087 Gm22473-201ENSMUST00000104114 132 ntBASIC5.71□□□□□ -1.5
Col1a1P11087 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col1a1P11087 Mir1193-201ENSMUST00000116761 121 ntBASIC5.71□□□□□ -1.5
Col1a1P11087 Gm14656-201ENSMUST00000120342 502 ntBASIC5.71□□□□□ -1.5
Col1a1P11087 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.71□□□□□ -1.5
Col1a1P11087 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.71□□□□□ -1.5
Col1a1P11087 Gm24751-201ENSMUST00000157844 102 ntBASIC5.71□□□□□ -1.5
Col1a1P11087 Gm25861-201ENSMUST00000158251 109 ntBASIC5.71□□□□□ -1.5
Col1a1P11087 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col1a1P11087 Gm27760-201ENSMUST00000185048 114 ntBASIC5.71□□□□□ -1.5
Col1a1P11087 Gm3145-201ENSMUST00000188584 220 ntBASIC5.71□□□□□ -1.5
Col1a1P11087 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col1a1P11087 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.71□□□□□ -1.5
Col1a1P11087 Gm8823-201ENSMUST00000193158 433 ntBASIC5.71□□□□□ -1.5
Col1a1P11087 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.71□□□□□ -1.5
Col1a1P11087 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Col1a1P11087 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col1a1P11087 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col1a1P11087 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Col1a1P11087 AC118639.1-203ENSMUST00000228425 2016 ntBASIC5.7□□□□□ -1.5
Col1a1P11087 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Col1a1P11087 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col1a1P11087 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col1a1P11087 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col1a1P11087 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.7□□□□□ -1.5
Col1a1P11087 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col1a1P11087 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.7□□□□□ -1.5
Col1a1P11087 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Col1a1P11087 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.7□□□□□ -1.5
Col1a1P11087 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col1a1P11087 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col1a1P11087 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col1a1P11087 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Col1a1P11087 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.7□□□□□ -1.5
Col1a1P11087 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.7□□□□□ -1.5
Col1a1P11087 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.7□□□□□ -1.5
Col1a1P11087 Gm5963-201ENSMUST00000143451 236 ntBASIC5.7□□□□□ -1.5
Col1a1P11087 Gm24507-201ENSMUST00000157683 134 ntBASIC5.7□□□□□ -1.5
Col1a1P11087 Gm3091-201ENSMUST00000163408 484 ntBASIC5.7□□□□□ -1.5
Col1a1P11087 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col1a1P11087 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col1a1P11087 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC5.7□□□□□ -1.5
Col1a1P11087 Gm43370-201ENSMUST00000196437 284 ntBASIC5.7□□□□□ -1.5
Col1a1P11087 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.7□□□□□ -1.5
Col1a1P11087 AC132433.1-201ENSMUST00000221553 1101 ntBASIC5.7□□□□□ -1.5
Col1a1P11087 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.7□□□□□ -1.5
Col1a1P11087 Gm23464-201ENSMUST00000083145 147 ntBASIC5.7□□□□□ -1.5
Col1a1P11087 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.7□□□□□ -1.5
Col1a1P11087 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col1a1P11087 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.7□□□□□ -1.5
Col1a1P11087 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col1a1P11087 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col1a1P11087 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col1a1P11087 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col1a1P11087 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
Col1a1P11087 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col1a1P11087 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col1a1P11087 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col1a1P11087 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col1a1P11087 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col1a1P11087 Gm23481-201ENSMUST00000104173 131 ntBASIC5.69□□□□□ -1.5
Col1a1P11087 Gm12131-201ENSMUST00000117479 359 ntBASIC5.69□□□□□ -1.5
Col1a1P11087 Gm11625-201ENSMUST00000119535 296 ntBASIC5.69□□□□□ -1.5
Col1a1P11087 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.69□□□□□ -1.5
Col1a1P11087 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC5.69□□□□□ -1.5
Col1a1P11087 Gm16125-201ENSMUST00000159003 339 ntBASIC5.69□□□□□ -1.5
Col1a1P11087 Gm27976-201ENSMUST00000183635 162 ntBASIC5.69□□□□□ -1.5
Col1a1P11087 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC5.69□□□□□ -1.5
Col1a1P11087 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.69□□□□□ -1.5
Col1a1P11087 Gm4574-201ENSMUST00000207804 542 ntBASIC5.69□□□□□ -1.5
Col1a1P11087 Gm44852-201ENSMUST00000207950 369 ntBASIC5.69□□□□□ -1.5
Col1a1P11087 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col1a1P11087 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col1a1P11087 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Col1a1P11087 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col1a1P11087 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col1a1P11087 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col1a1P11087 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.68□□□□□ -1.5
Col1a1P11087 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col1a1P11087 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Col1a1P11087 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col1a1P11087 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms