Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cldn5O54942 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cldn5O54942 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Cldn5O54942 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cldn5O54942 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.24□□□□□ -1.57
Cldn5O54942 Gm12423-201ENSMUST00000118334 135 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Gm11346-201ENSMUST00000118346 704 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Gm14957-201ENSMUST00000121069 817 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cldn5O54942 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Gm22870-201ENSMUST00000157501 112 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Gm25846-201ENSMUST00000158013 135 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Gm27037-201ENSMUST00000182270 960 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.24□□□□□ -1.57
Cldn5O54942 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.24□□□□□ -1.57
Cldn5O54942 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.24□□□□□ -1.57
Cldn5O54942 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Gm2622-201ENSMUST00000200018 471 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Gm19617-201ENSMUST00000202977 308 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Gm44820-201ENSMUST00000207420 396 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cldn5O54942 Gm7822-201ENSMUST00000222433 581 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cldn5O54942 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cldn5O54942 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Cldn5O54942 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cldn5O54942 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.24□□□□□ -1.57
Cldn5O54942 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.24□□□□□ -1.57
Cldn5O54942 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.24□□□□□ -1.57
Cldn5O54942 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cldn5O54942 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cldn5O54942 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Cldn5O54942 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Cldn5O54942 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cldn5O54942 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Cldn5O54942 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.23□□□□□ -1.57
Cldn5O54942 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Cldn5O54942 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Cldn5O54942 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cldn5O54942 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Cldn5O54942 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cldn5O54942 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cldn5O54942 Gm24578-201ENSMUST00000103970 129 ntBASIC5.23□□□□□ -1.57
Cldn5O54942 Gm25096-201ENSMUST00000104043 129 ntBASIC5.23□□□□□ -1.57
Cldn5O54942 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Cldn5O54942 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cldn5O54942 Gm14711-201ENSMUST00000117056 217 ntBASIC5.23□□□□□ -1.57
Cldn5O54942 Gm15670-201ENSMUST00000117740 447 ntBASIC5.23□□□□□ -1.57
Cldn5O54942 Gm3053-201ENSMUST00000161709 616 ntBASIC5.23□□□□□ -1.57
Cldn5O54942 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cldn5O54942 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC5.23□□□□□ -1.57
Cldn5O54942 Gm27039-201ENSMUST00000182438 962 ntBASIC5.23□□□□□ -1.57
Cldn5O54942 Gm27266-201ENSMUST00000184521 123 ntBASIC5.23□□□□□ -1.57
Cldn5O54942 Gm29664-201ENSMUST00000191125 463 ntBASIC5.23□□□□□ -1.57
Cldn5O54942 Gm43418-201ENSMUST00000201334 428 ntBASIC5.23□□□□□ -1.57
Cldn5O54942 Gm44604-201ENSMUST00000205475 496 ntBASIC5.23□□□□□ -1.57
Cldn5O54942 Gm2607-201ENSMUST00000212389 627 ntBASIC5.23□□□□□ -1.57
Cldn5O54942 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.23□□□□□ -1.57
Cldn5O54942 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.23□□□□□ -1.57
Cldn5O54942 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cldn5O54942 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Cldn5O54942 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cldn5O54942 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cldn5O54942 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.23□□□□□ -1.57
Cldn5O54942 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Cldn5O54942 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.23□□□□□ -1.57
Cldn5O54942 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Cldn5O54942 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
Cldn5O54942 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.23□□□□□ -1.57
Cldn5O54942 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cldn5O54942 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Cldn5O54942 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
Cldn5O54942 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cldn5O54942 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Cldn5O54942 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Cldn5O54942 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Cldn5O54942 Gm24160-201ENSMUST00000104594 126 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cldn5O54942 Gm11822-201ENSMUST00000119177 415 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Gm12813-201ENSMUST00000119615 902 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Gm9435-201ENSMUST00000120379 877 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Gm23673-201ENSMUST00000157474 298 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Gm26404-201ENSMUST00000158498 109 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Cldn5O54942 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC5.22□□□□□ -1.57
Cldn5O54942 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cldn5O54942 Mir6986-201ENSMUST00000184483 58 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.22□□□□□ -1.57
Cldn5O54942 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cldn5O54942 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC5.22□□□□□ -1.57
Cldn5O54942 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC5.22□□□□□ -1.57
Cldn5O54942 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 149.2 ms