Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm22841-201ENSMUST00000158443 62 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Mir6341-201ENSMUST00000183490 121 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm28628-201ENSMUST00000187006 264 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm29489-201ENSMUST00000188934 324 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Ighv5-5-201ENSMUST00000193826 329 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm37719-201ENSMUST00000194615 292 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm29784-201ENSMUST00000196217 406 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm18971-201ENSMUST00000197240 374 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm19649-201ENSMUST00000201126 822 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm19237-201ENSMUST00000205036 1132 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm45192-201ENSMUST00000206749 283 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm45316-201ENSMUST00000210128 162 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm4556-201ENSMUST00000217808 355 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm4921-201ENSMUST00000219804 992 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 AC120540.1-201ENSMUST00000221879 324 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 AC154257.2-201ENSMUST00000224166 340 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 AC170810.3-201ENSMUST00000226177 374 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 AC166344.2-201ENSMUST00000226747 374 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm24036-201ENSMUST00000082868 156 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Pcdh1F7BJK1 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm24935-201ENSMUST00000103770 110 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Mir465c-2-201ENSMUST00000104757 81 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm7974-201ENSMUST00000117154 408 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm13811-201ENSMUST00000117800 256 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm7058-201ENSMUST00000119209 902 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm6373-201ENSMUST00000121026 360 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm14847-201ENSMUST00000121978 519 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm11344-201ENSMUST00000122011 335 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm13724-201ENSMUST00000122395 1155 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm13738-201ENSMUST00000122437 469 ntBASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.49□□□□□ -1.53
Pcdh1F7BJK1 Gm14747-201ENSMUST00000149888 984 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms