Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm38368-201ENSMUST00000193181 1335 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm24429-201ENSMUST00000104076 132 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm24350-201ENSMUST00000104163 133 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm13503-201ENSMUST00000119017 446 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm14520-201ENSMUST00000119258 387 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm5383-201ENSMUST00000121177 617 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm11507-201ENSMUST00000156462 412 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm22885-201ENSMUST00000157410 107 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm22804-201ENSMUST00000158052 101 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm24860-201ENSMUST00000158457 276 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm24175-201ENSMUST00000158931 129 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm7335-201ENSMUST00000172475 373 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm37676-201ENSMUST00000195496 507 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm18007-201ENSMUST00000205019 844 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm17984-201ENSMUST00000205286 859 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 CT030124.1-201ENSMUST00000217130 235 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Mir365-2-201ENSMUST00000083555 112 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim3Q9R1R2 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm8129-201ENSMUST00000118230 213 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm15057-201ENSMUST00000121516 534 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm13738-201ENSMUST00000122437 469 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm22261-201ENSMUST00000158691 324 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm10319-202ENSMUST00000159439 846 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm18011-201ENSMUST00000203717 565 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm21041-201ENSMUST00000214829 823 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm37226-201ENSMUST00000191644 3255 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms