Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm11575-201ENSMUST00000122243 228 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm22038-201ENSMUST00000157277 242 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm22326-201ENSMUST00000158897 351 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm8783-201ENSMUST00000159764 522 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm25065-201ENSMUST00000177914 132 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm25891-201ENSMUST00000180050 132 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Mir6361-201ENSMUST00000185079 101 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm7634-201ENSMUST00000185778 553 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm29545-201ENSMUST00000188878 694 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm2367-201ENSMUST00000192374 472 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm38279-201ENSMUST00000194067 1131 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm42622-201ENSMUST00000197229 355 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm18215-201ENSMUST00000204429 798 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC6.11□□□□□ -1.43
RpainQ9CWY9 AC157017.1-201ENSMUST00000220148 364 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RpainQ9CWY9 AC154329.2-201ENSMUST00000225257 383 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 AC163295.1-201ENSMUST00000227840 314 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 AC112142.1-206ENSMUST00000228136 982 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RpainQ9CWY9 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm5582-201ENSMUST00000075251 522 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm8526-201ENSMUST00000079153 475 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm24707-201ENSMUST00000082812 107 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm22126-201ENSMUST00000083244 142 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RpainQ9CWY9 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RpainQ9CWY9 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RpainQ9CWY9 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm38189-201ENSMUST00000194495 1457 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
RpainQ9CWY9 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm13058-201ENSMUST00000117097 1435 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm22952-201ENSMUST00000116720 120 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm12683-201ENSMUST00000117528 415 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm11447-201ENSMUST00000118983 858 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm15971-201ENSMUST00000119372 211 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm15781-201ENSMUST00000120216 323 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm14831-201ENSMUST00000120253 409 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm7152-201ENSMUST00000163570 605 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm17085-201ENSMUST00000165425 502 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RpainQ9CWY9 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm7266-201ENSMUST00000187999 405 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm29950-201ENSMUST00000195273 237 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm43035-201ENSMUST00000197626 517 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm42428-201ENSMUST00000198677 302 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm42818-201ENSMUST00000198869 987 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm44773-201ENSMUST00000207374 557 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 AC153954.2-201ENSMUST00000213811 287 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Olfr790-204ENSMUST00000218901 1070 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm32526-201ENSMUST00000221878 981 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RpainQ9CWY9 AC124729.1-202ENSMUST00000225587 938 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 AC154838.1-201ENSMUST00000228944 911 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Gm5612-201ENSMUST00000053326 375 ntBASIC6.1□□□□□ -1.43
RpainQ9CWY9 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RpainQ9CWY9 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RpainQ9CWY9 mt-Tr-201ENSMUST00000082412 68 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms