Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm6717-201ENSMUST00000185549 838 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Gm37336-202ENSMUST00000193705 468 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Gm37719-201ENSMUST00000194615 292 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Gm2623-201ENSMUST00000199229 286 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Gm8137-201ENSMUST00000218997 463 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 AC126554.4-201ENSMUST00000221055 409 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 AC124356.2-201ENSMUST00000221874 336 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.14□□□□□ -1.59
Cstf1Q99LC2 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.14□□□□□ -1.59
Cstf1Q99LC2 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Igkv11-106-201ENSMUST00000103331 346 ntBASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Gm28196-201ENSMUST00000187719 640 ntBASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Gm28468-201ENSMUST00000188536 615 ntBASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.13□□□□□ -1.59
Cstf1Q99LC2 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 AV026068-237ENSMUST00000226075 572 ntBASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cstf1Q99LC2 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Gm17101-201ENSMUST00000169520 1588 ntBASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cstf1Q99LC2 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cstf1Q99LC2 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cstf1Q99LC2 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Gm22493-201ENSMUST00000104494 132 ntBASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Gm12190-201ENSMUST00000120001 187 ntBASIC5.12□□□□□ -1.59
Cstf1Q99LC2 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Gm26098-201ENSMUST00000157247 288 ntBASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Mir6907-201ENSMUST00000183764 71 ntBASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Mir6391-201ENSMUST00000184391 104 ntBASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Gm27611-201ENSMUST00000184690 108 ntBASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Gm4854-201ENSMUST00000185902 574 ntBASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Gm8861-201ENSMUST00000196346 832 ntBASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Gm8891-201ENSMUST00000198546 832 ntBASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC5.12□□□□□ -1.59
Cstf1Q99LC2 Gm3816-201ENSMUST00000209803 433 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 107.4 ms