Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 AC138667.2-201ENSMUST00000224880 598 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm2531-201ENSMUST00000075609 512 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm22684-201ENSMUST00000082849 132 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm26072-201ENSMUST00000083135 107 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm37127-201ENSMUST00000192924 3036 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm20706-201ENSMUST00000175985 2023 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm38082-201ENSMUST00000192800 6882 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm13854-201ENSMUST00000121183 1679 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm5925-201ENSMUST00000105016 1497 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm23485-201ENSMUST00000104181 155 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm11878-201ENSMUST00000117908 400 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm7363-201ENSMUST00000119883 399 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm23430-201ENSMUST00000122490 314 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm25057-201ENSMUST00000157366 88 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm26162-201ENSMUST00000157793 132 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm26037-201ENSMUST00000158150 311 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm26925-201ENSMUST00000182470 957 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm37996-201ENSMUST00000191859 367 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm43043-201ENSMUST00000196579 412 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm43368-201ENSMUST00000200638 409 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm6070-201ENSMUST00000207275 419 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 AC101677.1-201ENSMUST00000218590 158 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 AC137902.1-201ENSMUST00000228184 102 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm7204-201ENSMUST00000062591 600 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm24032-201ENSMUST00000083932 159 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Gm42630-201ENSMUST00000195908 3448 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC7.2□□□□□ -1.26
Trim47Q8C0E3 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm37959-201ENSMUST00000191700 2897 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms