Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim35Q8C006 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC8.18□□□□□ -1.1
Trim35Q8C006 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 Dcpp2-202ENSMUST00000168272 589 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm18779-201ENSMUST00000173444 577 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm23725-201ENSMUST00000177876 107 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm24464-201ENSMUST00000179697 107 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm37693-201ENSMUST00000194562 234 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm37450-201ENSMUST00000195218 170 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm46194-201ENSMUST00000218136 320 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 AC167013.2-202ENSMUST00000227035 333 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 Tssk4-207ENSMUST00000228395 1273 ntAPPRIS P5 BASIC8.18□□□□□ -1.1
Trim35Q8C006 Ghrh-201ENSMUST00000029172 516 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim35Q8C006 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim35Q8C006 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim35Q8C006 Scfd1-205ENSMUST00000219434 2749 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm43942-201ENSMUST00000204522 2859 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 Klhl5-201ENSMUST00000101191 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Slitrk2-201ENSMUST00000036043 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim35Q8C006 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Trim35Q8C006 Cyp2d12-201ENSMUST00000068861 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Trim35Q8C006 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Trim35Q8C006 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim35Q8C006 Ralgps2-201ENSMUST00000027886 4237 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim35Q8C006 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm22831-201ENSMUST00000102473 109 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm8475-201ENSMUST00000118211 526 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm7645-201ENSMUST00000119008 788 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm7219-201ENSMUST00000119619 297 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm11440-201ENSMUST00000121509 527 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm11730-202ENSMUST00000147186 753 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 Tle6-213ENSMUST00000151858 627 ntTSL 3 BASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm15756-201ENSMUST00000161447 670 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm4613-201ENSMUST00000165488 276 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm17157-201ENSMUST00000172397 348 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC8.17□□□□□ -1.1
Trim35Q8C006 Mir669j-201ENSMUST00000179023 121 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm23571-201ENSMUST00000180073 127 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm27976-201ENSMUST00000183635 162 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm19206-201ENSMUST00000186401 827 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm7837-201ENSMUST00000190873 412 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm37282-201ENSMUST00000191987 164 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm37506-201ENSMUST00000192008 143 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm37665-201ENSMUST00000192353 149 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Ighv1-46-201ENSMUST00000193988 351 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm43835-201ENSMUST00000195932 149 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm43535-201ENSMUST00000197846 164 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm44379-201ENSMUST00000204501 164 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm44268-201ENSMUST00000204814 164 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm44609-201ENSMUST00000207157 460 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm3816-201ENSMUST00000209803 433 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 CT030242.3-201ENSMUST00000221231 581 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Gm20302-201ENSMUST00000080671 275 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Snora74a-201ENSMUST00000083715 196 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Trim35Q8C006 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 AC123705.2-201ENSMUST00000221653 2009 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim35Q8C006 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 CT010453.1-201ENSMUST00000226795 2201 ntBASIC8.17□□□□□ -1.1
Trim35Q8C006 Golga1-201ENSMUST00000039165 4869 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim35Q8C006 AC154347.1-201ENSMUST00000221358 3105 ntBASIC8.16□□□□□ -1.1
Trim35Q8C006 Zfp750-201ENSMUST00000092298 3232 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim35Q8C006 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim35Q8C006 Prkaa1-202ENSMUST00000228218 4618 ntBASIC8.16□□□□□ -1.1
Trim35Q8C006 Gm23472-201ENSMUST00000101806 191 ntBASIC8.16□□□□□ -1.1
Trim35Q8C006 Gm23192-201ENSMUST00000102434 96 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 106.9 ms