Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC123064.1-201ENSMUST00000218950 406 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Usp40Q8BWR4 CT025603.4-201ENSMUST00000225777 413 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm4963-201ENSMUST00000072718 378 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm23972-201ENSMUST00000083322 165 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Mir30b-201ENSMUST00000083542 96 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm44901-201ENSMUST00000208157 3977 ntBASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.22
Usp40Q8BWR4 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Usp40Q8BWR4 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Usp40Q8BWR4 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Usp40Q8BWR4 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.23
Usp40Q8BWR4 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Gm15583-201ENSMUST00000116191 3510 ntBASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Gm14932-201ENSMUST00000117112 453 ntBASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Gm25865-201ENSMUST00000158247 104 ntBASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Gm26194-201ENSMUST00000175036 71 ntBASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Gm18728-201ENSMUST00000186155 753 ntBASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Gm28396-201ENSMUST00000190309 379 ntBASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Gm19224-201ENSMUST00000190477 793 ntBASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Gm19124-201ENSMUST00000191041 832 ntBASIC7.39□□□□□ -1.23
Usp40Q8BWR4 AC152979.3-201ENSMUST00000217720 479 ntBASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 CT009600.2-201ENSMUST00000226638 481 ntBASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Gm6558-201ENSMUST00000191934 1973 ntBASIC7.39□□□□□ -1.23
Usp40Q8BWR4 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm6545-201ENSMUST00000217186 1786 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 AC137871.4-201ENSMUST00000226323 3901 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm43872-201ENSMUST00000203218 2213 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 n-R5s174-201ENSMUST00000122638 121 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm23441-201ENSMUST00000157268 127 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm21909-201ENSMUST00000178260 439 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm2950-201ENSMUST00000185530 520 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm28724-201ENSMUST00000186149 625 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm37491-201ENSMUST00000192552 1111 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Mir6516-201ENSMUST00000196236 110 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm43390-201ENSMUST00000196614 421 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm43768-201ENSMUST00000198380 1258 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm42461-201ENSMUST00000198627 1150 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm31520-201ENSMUST00000203048 733 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 AC161114.1-201ENSMUST00000218223 474 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 AC134439.2-201ENSMUST00000221950 467 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 AC124549.1-201ENSMUST00000225912 333 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 AC140393.2-201ENSMUST00000226894 943 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 CT572983.1-201ENSMUST00000226895 514 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm22575-201ENSMUST00000082981 110 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm37262-201ENSMUST00000192816 1818 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm43210-201ENSMUST00000196743 6152 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms