Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.26□□□□□ -1.57
Trim43aQ3TL54 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.26□□□□□ -1.57
Trim43aQ3TL54 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.26□□□□□ -1.57
Trim43aQ3TL54 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.26□□□□□ -1.57
Trim43aQ3TL54 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.26□□□□□ -1.57
Trim43aQ3TL54 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.26□□□□□ -1.57
Trim43aQ3TL54 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim43aQ3TL54 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim43aQ3TL54 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.26□□□□□ -1.57
Trim43aQ3TL54 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.26□□□□□ -1.57
Trim43aQ3TL54 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim43aQ3TL54 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.26□□□□□ -1.57
Trim43aQ3TL54 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
Trim43aQ3TL54 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim43aQ3TL54 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Gm15490-201ENSMUST00000119894 387 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Gm7670-201ENSMUST00000121272 641 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Gm13440-201ENSMUST00000121665 496 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Gm14587-201ENSMUST00000121714 658 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Gm25293-201ENSMUST00000122792 285 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Gm9134-201ENSMUST00000193186 551 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Gm44456-201ENSMUST00000196554 89 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Gm29755-201ENSMUST00000196976 948 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Gm42437-201ENSMUST00000197263 923 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Gm42542-201ENSMUST00000197978 268 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Gm45215-201ENSMUST00000206407 395 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trim43aQ3TL54 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Trim43aQ3TL54 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.25□□□□□ -1.57
Trim43aQ3TL54 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Gm23302-201ENSMUST00000082710 100 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Trim43aQ3TL54 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Trim43aQ3TL54 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm11781-201ENSMUST00000118328 472 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm11805-201ENSMUST00000121238 600 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm15227-201ENSMUST00000121844 399 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm22106-201ENSMUST00000122544 127 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm11197-201ENSMUST00000145158 839 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm24402-201ENSMUST00000157873 91 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm10319-202ENSMUST00000159439 846 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm28017-201ENSMUST00000183434 126 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm18802-201ENSMUST00000186270 888 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm28683-201ENSMUST00000187134 615 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm28840-205ENSMUST00000189320 615 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm28835-203ENSMUST00000190062 615 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm37882-201ENSMUST00000195254 196 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm18007-201ENSMUST00000205019 844 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm32536-201ENSMUST00000205209 445 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim43aQ3TL54 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim43aQ3TL54 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Trim43aQ3TL54 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim43aQ3TL54 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Trim43aQ3TL54 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim43aQ3TL54 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.23□□□□□ -1.57
Trim43aQ3TL54 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.23□□□□□ -1.57
Trim43aQ3TL54 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms