Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Sox1P53783 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Sox1P53783 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Sox1P53783 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Sox1P53783 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Sox1P53783 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
Sox1P53783 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox1P53783 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox1P53783 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox1P53783 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sox1P53783 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Sox1P53783 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox1P53783 Gm43990-201ENSMUST00000203790 1691 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm28583-201ENSMUST00000188903 2141 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.43□□□□□ -1.38
Sox1P53783 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox1P53783 Gm24989-201ENSMUST00000104461 88 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sox1P53783 Gm11843-201ENSMUST00000118984 425 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm6587-201ENSMUST00000120219 613 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm13488-201ENSMUST00000120419 179 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm14530-201ENSMUST00000122391 333 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.43□□□□□ -1.38
Sox1P53783 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.43□□□□□ -1.38
Sox1P53783 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC6.43□□□□□ -1.38
Sox1P53783 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.43□□□□□ -1.38
Sox1P53783 Gm25434-201ENSMUST00000158278 167 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm24734-201ENSMUST00000158860 262 ntBASIC6.43□□□□□ -1.38
Sox1P53783 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
Sox1P53783 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Sox1P53783 Gm17149-201ENSMUST00000164712 375 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm9613-201ENSMUST00000171662 196 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm24315-201ENSMUST00000177835 127 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Mir6992-201ENSMUST00000183342 109 ntBASIC6.43□□□□□ -1.38
Sox1P53783 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC6.43□□□□□ -1.38
Sox1P53783 Gm18291-201ENSMUST00000190791 301 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm38015-201ENSMUST00000193048 188 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm38019-201ENSMUST00000195133 380 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm9173-201ENSMUST00000198054 400 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm44382-201ENSMUST00000198683 122 ntBASIC6.43□□□□□ -1.38
Sox1P53783 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC6.43□□□□□ -1.38
Sox1P53783 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC6.43□□□□□ -1.38
Sox1P53783 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC6.43□□□□□ -1.38
Sox1P53783 Gm9315-201ENSMUST00000222696 908 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm10095-201ENSMUST00000222765 483 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC6.43□□□□□ -1.38
Sox1P53783 Ap3m1-208ENSMUST00000224016 764 ntBASIC6.43□□□□□ -1.38
Sox1P53783 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox1P53783 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Sox1P53783 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Sox1P53783 Mir421-201ENSMUST00000083575 76 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Mir181a-1-201ENSMUST00000083631 87 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox1P53783 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox1P53783 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox1P53783 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox1P53783 Gm43121-201ENSMUST00000199065 1305 ntBASIC6.43□□□□□ -1.38
Sox1P53783 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.43□□□□□ -1.38
Sox1P53783 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.43□□□□□ -1.38
Sox1P53783 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.43□□□□□ -1.38
Sox1P53783 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Sox1P53783 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Sox1P53783 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Sox1P53783 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sox1P53783 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Sox1P53783 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Sox1P53783 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.42□□□□□ -1.38
Sox1P53783 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Sox1P53783 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Sox1P53783 Gm24173-201ENSMUST00000104130 128 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Sox1P53783 Gm15175-201ENSMUST00000117629 132 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.42□□□□□ -1.38
Sox1P53783 Gm25383-201ENSMUST00000157810 144 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Gm22726-201ENSMUST00000158089 179 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Gm25439-201ENSMUST00000158280 131 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms