Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm13724-201ENSMUST00000122395 1155 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC7.18□□□□□ -1.26
Rfx1P48377 Gm22214-201ENSMUST00000157563 172 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Rfx1P48377 Trbv10-201ENSMUST00000168322 289 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC7.18□□□□□ -1.26
Rfx1P48377 Gm18354-201ENSMUST00000173515 1068 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Mir5107-201ENSMUST00000175586 88 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Rfx1P48377 Gm4845-201ENSMUST00000179202 562 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Rfx1P48377 Gm28343-201ENSMUST00000185386 112 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Rfx1P48377 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC7.18□□□□□ -1.26
Rfx1P48377 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC7.18□□□□□ -1.26
Rfx1P48377 Gm29138-201ENSMUST00000191444 348 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm43717-201ENSMUST00000198684 310 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm43418-201ENSMUST00000201334 428 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm5318-201ENSMUST00000205249 406 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC7.18□□□□□ -1.26
Rfx1P48377 Gm21112-201ENSMUST00000212224 578 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm7760-201ENSMUST00000212265 578 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm7807-201ENSMUST00000212475 578 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Rfx1P48377 Gm18225-201ENSMUST00000216708 742 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.18□□□□□ -1.26
Rfx1P48377 Gm4556-201ENSMUST00000217808 355 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm19168-201ENSMUST00000218804 1091 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Rfx1P48377 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Rfx1P48377 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC7.18□□□□□ -1.26
Rfx1P48377 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Rfx1P48377 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Rfx1P48377 Gm24411-201ENSMUST00000083428 131 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Rfx1P48377 Gm23516-201ENSMUST00000093728 107 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Rfx1P48377 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Rfx1P48377 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Rfx1P48377 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
Rfx1P48377 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Rfx1P48377 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Rfx1P48377 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Rfx1P48377 Gm38699-201ENSMUST00000221301 1740 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm38257-201ENSMUST00000195881 2761 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Rfx1P48377 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Rfx1P48377 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Rfx1P48377 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Rfx1P48377 Gm10062-201ENSMUST00000072180 1470 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Rfx1P48377 Gm38142-201ENSMUST00000194093 3555 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Rfx1P48377 Gm16436-201ENSMUST00000121510 1607 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Rfx1P48377 Gm35755-201ENSMUST00000222392 2077 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Rfx1P48377 Gm11898-201ENSMUST00000117161 385 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Gm11908-201ENSMUST00000117755 347 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Gm15916-201ENSMUST00000118355 736 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Gm14489-201ENSMUST00000120868 901 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Rfx1P48377 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC7.17□□□□□ -1.26
Rfx1P48377 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Rfx1P48377 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Rfx1P48377 Gm23674-201ENSMUST00000157473 131 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Gm26321-201ENSMUST00000157740 242 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC7.17□□□□□ -1.26
Rfx1P48377 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Rfx1P48377 Gm27861-201ENSMUST00000183920 214 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Mir7212-201ENSMUST00000184098 61 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Rfx1P48377 Trbv22-201ENSMUST00000191697 291 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC7.17□□□□□ -1.26
Rfx1P48377 Gm20128-201ENSMUST00000196189 417 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Gm20997-201ENSMUST00000205148 231 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Gm45628-201ENSMUST00000210849 274 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Gm9088-201ENSMUST00000220237 508 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 AC105950.1-201ENSMUST00000222637 408 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Rfx1P48377 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Rfx1P48377 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Rfx1P48377 Gm26984-201ENSMUST00000182345 3510 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 AC164092.3-201ENSMUST00000216970 1323 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.17□□□□□ -1.26
Rfx1P48377 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Rfx1P48377 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC7.17□□□□□ -1.26
Rfx1P48377 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC7.17□□□□□ -1.26
Rfx1P48377 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Rfx1P48377 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Rfx1P48377 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Rfx1P48377 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Rfx1P48377 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms