Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm25224-201ENSMUST00000158195 68 ntBASIC5.56□□□□□ -1.52
Col2a1P28481 Gm20428-201ENSMUST00000174365 283 ntBASIC5.56□□□□□ -1.52
Col2a1P28481 Gm22367-201ENSMUST00000178930 132 ntBASIC5.56□□□□□ -1.52
Col2a1P28481 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col2a1P28481 Gm28116-201ENSMUST00000189064 387 ntBASIC5.56□□□□□ -1.52
Col2a1P28481 Gm20954-201ENSMUST00000189078 644 ntBASIC5.56□□□□□ -1.52
Col2a1P28481 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.56□□□□□ -1.52
Col2a1P28481 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Col2a1P28481 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col2a1P28481 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col2a1P28481 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col2a1P28481 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
Col2a1P28481 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col2a1P28481 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.55□□□□□ -1.52
Col2a1P28481 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col2a1P28481 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Col2a1P28481 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col2a1P28481 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col2a1P28481 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.55□□□□□ -1.52
Col2a1P28481 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Col2a1P28481 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col2a1P28481 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.55□□□□□ -1.52
Col2a1P28481 Gm15779-201ENSMUST00000117470 412 ntBASIC5.55□□□□□ -1.52
Col2a1P28481 Gm12466-201ENSMUST00000121199 620 ntBASIC5.55□□□□□ -1.52
Col2a1P28481 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Col2a1P28481 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.55□□□□□ -1.52
Col2a1P28481 Gm24751-201ENSMUST00000157844 102 ntBASIC5.55□□□□□ -1.52
Col2a1P28481 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col2a1P28481 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC5.55□□□□□ -1.52
Col2a1P28481 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC5.55□□□□□ -1.52
Col2a1P28481 Gm27037-201ENSMUST00000182270 960 ntBASIC5.55□□□□□ -1.52
Col2a1P28481 Mir7022-201ENSMUST00000183749 61 ntBASIC5.55□□□□□ -1.52
Col2a1P28481 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.55□□□□□ -1.52
Col2a1P28481 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.55□□□□□ -1.52
Col2a1P28481 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col2a1P28481 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col2a1P28481 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col2a1P28481 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Col2a1P28481 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col2a1P28481 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col2a1P28481 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col2a1P28481 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.55□□□□□ -1.52
Col2a1P28481 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col2a1P28481 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Col2a1P28481 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Col2a1P28481 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Col2a1P28481 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Col2a1P28481 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Col2a1P28481 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col2a1P28481 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col2a1P28481 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.55□□□□□ -1.52
Col2a1P28481 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.55□□□□□ -1.52
Col2a1P28481 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.55□□□□□ -1.52
Col2a1P28481 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
Col2a1P28481 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.54□□□□□ -1.52
Col2a1P28481 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col2a1P28481 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col2a1P28481 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Col2a1P28481 Gm4852-201ENSMUST00000121202 729 ntBASIC5.54□□□□□ -1.52
Col2a1P28481 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC5.54□□□□□ -1.52
Col2a1P28481 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col2a1P28481 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.54□□□□□ -1.52
Col2a1P28481 Gm23501-201ENSMUST00000157744 256 ntBASIC5.54□□□□□ -1.52
Col2a1P28481 Gm15796-201ENSMUST00000162135 204 ntBASIC5.54□□□□□ -1.52
Col2a1P28481 Magea9-ps-202ENSMUST00000167328 899 ntBASIC5.54□□□□□ -1.52
Col2a1P28481 Gm18128-201ENSMUST00000172625 511 ntBASIC5.54□□□□□ -1.52
Col2a1P28481 Gm18828-202ENSMUST00000181035 310 ntBASIC5.54□□□□□ -1.52
Col2a1P28481 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC5.54□□□□□ -1.52
Col2a1P28481 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.54□□□□□ -1.52
Col2a1P28481 Gm6366-201ENSMUST00000198766 826 ntBASIC5.54□□□□□ -1.52
Col2a1P28481 Gm2522-201ENSMUST00000204280 322 ntBASIC5.54□□□□□ -1.52
Col2a1P28481 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC5.54□□□□□ -1.52
Col2a1P28481 Mir412-201ENSMUST00000083636 80 ntBASIC5.54□□□□□ -1.52
Col2a1P28481 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col2a1P28481 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.54□□□□□ -1.52
Col2a1P28481 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.54□□□□□ -1.52
Col2a1P28481 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col2a1P28481 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col2a1P28481 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col2a1P28481 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col2a1P28481 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col2a1P28481 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Col2a1P28481 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col2a1P28481 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col2a1P28481 Mir292-201ENSMUST00000104847 82 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Col2a1P28481 Gm15185-201ENSMUST00000117397 746 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Gm12704-201ENSMUST00000119789 464 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col2a1P28481 Gm23171-201ENSMUST00000157159 264 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Gm25278-201ENSMUST00000157267 120 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Gm24774-201ENSMUST00000157384 134 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Gm24689-201ENSMUST00000157760 104 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Gm19898-201ENSMUST00000177490 251 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col2a1P28481 Gm37700-201ENSMUST00000192617 965 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Gm32536-201ENSMUST00000205209 445 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Gm3189-201ENSMUST00000205595 832 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 109.9 ms