Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BdnfP21237 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.37□□□□□ -1.55
BdnfP21237 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.37□□□□□ -1.55
BdnfP21237 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.37□□□□□ -1.55
BdnfP21237 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.37□□□□□ -1.55
BdnfP21237 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BdnfP21237 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BdnfP21237 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BdnfP21237 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BdnfP21237 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.37□□□□□ -1.55
BdnfP21237 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BdnfP21237 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.37□□□□□ -1.55
BdnfP21237 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.37□□□□□ -1.55
BdnfP21237 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BdnfP21237 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.37□□□□□ -1.55
BdnfP21237 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BdnfP21237 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.37□□□□□ -1.55
BdnfP21237 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BdnfP21237 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.37□□□□□ -1.55
BdnfP21237 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.37□□□□□ -1.55
BdnfP21237 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
BdnfP21237 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BdnfP21237 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
BdnfP21237 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
BdnfP21237 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BdnfP21237 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.37□□□□□ -1.55
BdnfP21237 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
BdnfP21237 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.37□□□□□ -1.55
BdnfP21237 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
BdnfP21237 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
BdnfP21237 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.37□□□□□ -1.55
BdnfP21237 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
BdnfP21237 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BdnfP21237 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
BdnfP21237 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
BdnfP21237 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
BdnfP21237 Gm12077-201ENSMUST00000117049 364 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm13733-201ENSMUST00000117290 535 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm12494-201ENSMUST00000121684 521 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm11341-201ENSMUST00000122316 447 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BdnfP21237 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BdnfP21237 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.36□□□□□ -1.55
BdnfP21237 Gm26410-201ENSMUST00000157670 261 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm26170-201ENSMUST00000158419 148 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm17194-201ENSMUST00000164610 348 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm24111-201ENSMUST00000175491 97 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
BdnfP21237 Gm21809-201ENSMUST00000178495 468 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
BdnfP21237 Gm17412-201ENSMUST00000179261 468 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
BdnfP21237 Mir6244-201ENSMUST00000184156 117 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
BdnfP21237 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BdnfP21237 Gm37708-201ENSMUST00000192337 895 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm7897-201ENSMUST00000193981 554 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm18984-201ENSMUST00000193998 1124 ntBASIC5.36□□□□□ -1.55
BdnfP21237 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm38360-201ENSMUST00000195130 454 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm36986-201ENSMUST00000195320 353 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm42886-201ENSMUST00000199214 466 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm43967-201ENSMUST00000203787 301 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm45870-201ENSMUST00000211269 601 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm3690-201ENSMUST00000211341 262 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
BdnfP21237 Gm18789-201ENSMUST00000216115 550 ntBASIC5.36□□□□□ -1.55
BdnfP21237 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC5.36□□□□□ -1.55
BdnfP21237 Gm5655-201ENSMUST00000221078 901 ntBASIC5.36□□□□□ -1.55
BdnfP21237 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.36□□□□□ -1.55
BdnfP21237 AL662807.1-201ENSMUST00000224183 126 ntBASIC5.36□□□□□ -1.55
BdnfP21237 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.36□□□□□ -1.55
BdnfP21237 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BdnfP21237 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BdnfP21237 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
BdnfP21237 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.36□□□□□ -1.55
BdnfP21237 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
BdnfP21237 Gm13340-201ENSMUST00000117219 1545 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BdnfP21237 AC164102.1-201ENSMUST00000220524 1553 ntBASIC5.36□□□□□ -1.55
BdnfP21237 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
BdnfP21237 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
BdnfP21237 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
BdnfP21237 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BdnfP21237 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
BdnfP21237 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
BdnfP21237 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
BdnfP21237 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
BdnfP21237 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BdnfP21237 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BdnfP21237 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
BdnfP21237 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BdnfP21237 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.36□□□□□ -1.55
BdnfP21237 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
BdnfP21237 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
BdnfP21237 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.35□□□□□ -1.55
BdnfP21237 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BdnfP21237 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms