Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm44021-201ENSMUST00000203055 3516 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm14373-201ENSMUST00000122467 2158 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm22671-201ENSMUST00000104420 134 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm14727-201ENSMUST00000118526 525 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm14721-201ENSMUST00000121381 525 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm22960-201ENSMUST00000122517 104 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm24909-201ENSMUST00000157290 280 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm26323-201ENSMUST00000157743 175 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm24057-201ENSMUST00000158616 302 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm3531-201ENSMUST00000162698 489 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm3140-201ENSMUST00000163523 481 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm22646-201ENSMUST00000175130 115 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm7426-201ENSMUST00000179046 404 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm21839-201ENSMUST00000179536 378 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 n-R5s93-201ENSMUST00000180091 119 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm26729-201ENSMUST00000180744 352 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm27636-201ENSMUST00000184528 122 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm29524-201ENSMUST00000190819 699 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm38185-201ENSMUST00000193195 694 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm42672-201ENSMUST00000197821 352 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm4525-201ENSMUST00000198831 254 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm44431-201ENSMUST00000203500 413 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm5154-201ENSMUST00000203971 399 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 AC163033.1-201ENSMUST00000218608 157 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm8158-201ENSMUST00000219220 465 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm8249-201ENSMUST00000219225 465 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm8112-201ENSMUST00000219637 465 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 AC134468.2-201ENSMUST00000222549 672 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 AC102676.1-201ENSMUST00000228131 719 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 AC131033.1-201ENSMUST00000228223 279 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm22997-201ENSMUST00000082845 107 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm23733-201ENSMUST00000083750 106 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm16261-201ENSMUST00000096813 205 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm37161-201ENSMUST00000191994 2697 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Hoxd3P09027 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm13301-201ENSMUST00000121728 2446 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Hoxd3P09027 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Hoxd3P09027 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Gm44652-201ENSMUST00000208648 2854 ntBASIC5.53□□□□□ -1.52
Hoxd3P09027 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hoxd3P09027 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Hoxd3P09027 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Hoxd3P09027 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC5.52□□□□□ -1.53
Hoxd3P09027 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.52□□□□□ -1.53
Hoxd3P09027 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.52□□□□□ -1.53
Hoxd3P09027 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms