Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc28aQ8CEI3 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc28aQ8CEI3 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc28aQ8CEI3 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc28aQ8CEI3 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.05□□□□□ -1.6
Ccdc28aQ8CEI3 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.05□□□□□ -1.6
Ccdc28aQ8CEI3 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc28aQ8CEI3 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Ccdc28aQ8CEI3 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc28aQ8CEI3 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Gm11882-201ENSMUST00000121463 506 ntBASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Mir7082-201ENSMUST00000183526 92 ntBASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Mir7687-201ENSMUST00000184722 59 ntBASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Gm21617-201ENSMUST00000188297 691 ntBASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Gm36998-201ENSMUST00000193205 704 ntBASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Gm43717-201ENSMUST00000198684 310 ntBASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Gm43054-201ENSMUST00000199495 884 ntBASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Gm43554-201ENSMUST00000199987 186 ntBASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Gm4574-201ENSMUST00000207804 542 ntBASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.04□□□□□ -1.6
Ccdc28aQ8CEI3 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm13250-201ENSMUST00000117209 753 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm8595-201ENSMUST00000118250 630 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm12041-201ENSMUST00000121606 602 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm11507-201ENSMUST00000156462 412 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm23539-201ENSMUST00000157537 224 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm22940-201ENSMUST00000158560 155 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm16134-201ENSMUST00000161714 336 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm17142-201ENSMUST00000164933 645 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm16378-201ENSMUST00000179168 342 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm28943-201ENSMUST00000186187 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm28736-201ENSMUST00000186257 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm29401-201ENSMUST00000186690 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm29178-204ENSMUST00000186784 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm28589-201ENSMUST00000186991 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm28936-201ENSMUST00000187153 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm29121-201ENSMUST00000187611 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm28243-201ENSMUST00000187801 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm28844-202ENSMUST00000187977 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm29058-201ENSMUST00000189510 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm29624-201ENSMUST00000190018 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm28780-201ENSMUST00000190223 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm28969-211ENSMUST00000190992 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm28990-207ENSMUST00000191219 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm18348-201ENSMUST00000191227 820 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms