Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Gm24117-201ENSMUST00000103973 133 ntBASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Gm22194-201ENSMUST00000116869 95 ntBASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Gm14082-201ENSMUST00000118582 801 ntBASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Gm15981-201ENSMUST00000119196 457 ntBASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Gm23046-201ENSMUST00000158369 284 ntBASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Gm22940-201ENSMUST00000158560 155 ntBASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Gm44237-201ENSMUST00000205183 936 ntBASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Gm6776-201ENSMUST00000057752 900 ntBASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Alx1Q8C8B0 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Mir879-201ENSMUST00000104703 76 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Gm13132-201ENSMUST00000121194 472 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Gm16107-201ENSMUST00000162523 862 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Gm26950-201ENSMUST00000182734 498 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Gm29332-201ENSMUST00000190829 227 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Gm6546-201ENSMUST00000192096 766 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Gm4574-201ENSMUST00000207804 542 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 AC117240.2-201ENSMUST00000220921 263 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Snora52-201ENSMUST00000082732 137 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Mir134-201ENSMUST00000083492 71 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Alx1Q8C8B0 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Gm14065-201ENSMUST00000120848 585 ntBASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Gm3362-201ENSMUST00000148102 466 ntBASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Gm22529-201ENSMUST00000158817 123 ntBASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Gm21241-201ENSMUST00000179551 934 ntBASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Gm8604-201ENSMUST00000183150 965 ntBASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Alx1Q8C8B0 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Alx1Q8C8B0 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms