Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm42483-201ENSMUST00000197556 1742 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Gm4927-201ENSMUST00000219548 1318 ntBASIC7.23□□□□□ -1.25
Trim47Q8C0E3 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim47Q8C0E3 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm12633-201ENSMUST00000117742 1705 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Mir804-201ENSMUST00000103251 95 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm22953-201ENSMUST00000116724 101 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm7485-201ENSMUST00000119502 1109 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm12755-201ENSMUST00000122297 282 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm24383-201ENSMUST00000122691 333 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Defb44-ps-201ENSMUST00000126871 219 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm23032-201ENSMUST00000157995 107 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm24901-201ENSMUST00000158125 110 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm18833-201ENSMUST00000173218 862 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm20794-201ENSMUST00000177626 628 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm23568-201ENSMUST00000177960 92 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm24829-201ENSMUST00000179245 92 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm29231-201ENSMUST00000179850 319 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Mir3473e-201ENSMUST00000183932 110 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm45690-201ENSMUST00000210775 246 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 AC134917.2-201ENSMUST00000223354 124 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm21286-201ENSMUST00000098035 545 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim47Q8C0E3 Gm34294-201ENSMUST00000191912 4263 ntBASIC7.21□□□□□ -1.25
Trim47Q8C0E3 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Trim47Q8C0E3 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Trim47Q8C0E3 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Trim47Q8C0E3 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC7.21□□□□□ -1.25
Trim47Q8C0E3 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm12739-201ENSMUST00000119769 382 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm12340-201ENSMUST00000121617 462 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm25184-201ENSMUST00000157753 163 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm4152-201ENSMUST00000172675 259 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm26557-201ENSMUST00000180756 493 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm29045-201ENSMUST00000187278 698 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm37418-201ENSMUST00000195031 274 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm42805-201ENSMUST00000196158 276 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm45082-201ENSMUST00000206082 601 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm45596-201ENSMUST00000209279 434 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC7.21□□□□□ -1.26
Trim47Q8C0E3 Gm8681-201ENSMUST00000219115 618 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms