Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm20039-201ENSMUST00000210329 394 ntBASIC8.2□□□□□ -1.1
Trim35Q8C006 Gm18487-201ENSMUST00000215826 878 ntBASIC8.2□□□□□ -1.1
Trim35Q8C006 AC129219.1-201ENSMUST00000224336 448 ntBASIC8.2□□□□□ -1.1
Trim35Q8C006 AC154380.1-201ENSMUST00000226804 720 ntBASIC8.2□□□□□ -1.1
Trim35Q8C006 Spag11a-201ENSMUST00000058955 436 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Cdh26-201ENSMUST00000042092 2891 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Cd36-206ENSMUST00000197890 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Gm26633-201ENSMUST00000180546 3256 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Gm4855-201ENSMUST00000192270 1967 ntBASIC8.2□□□□□ -1.1
Trim35Q8C006 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Gsdma2-202ENSMUST00000093938 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Serpina3k-201ENSMUST00000043058 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Gm37457-201ENSMUST00000193639 2433 ntBASIC8.2□□□□□ -1.1
Trim35Q8C006 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 2610008E11Rik-201ENSMUST00000039271 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim35Q8C006 Skap1-201ENSMUST00000071510 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim35Q8C006 Gm43831-201ENSMUST00000200461 2598 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
Trim35Q8C006 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm33111-202ENSMUST00000219954 3388 ntTSL 2 BASIC8.19□□□□□ -1.1
Trim35Q8C006 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Trim35Q8C006 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm37150-201ENSMUST00000193900 2754 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm15834-201ENSMUST00000129740 2097 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Dennd2d-204ENSMUST00000183271 2050 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 AC174797.3-203ENSMUST00000225749 2078 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Trim35Q8C006 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC8.19□□□□□ -1.1
Trim35Q8C006 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm13876-201ENSMUST00000118451 261 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm14830-201ENSMUST00000121899 700 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm14613-201ENSMUST00000122239 752 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm14089-201ENSMUST00000130025 318 ntTSL 3 BASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm22429-201ENSMUST00000158553 130 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm22949-201ENSMUST00000158562 105 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm16303-201ENSMUST00000161498 390 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm25442-201ENSMUST00000177270 92 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Trim35Q8C006 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm27353-201ENSMUST00000184712 122 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm8939-201ENSMUST00000192577 964 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm37729-201ENSMUST00000194761 1172 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim35Q8C006 5830408C22Rik-204ENSMUST00000211653 351 ntTSL 3 BASIC8.19□□□□□ -1.1
Trim35Q8C006 AC109180.1-201ENSMUST00000218676 398 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm40692-201ENSMUST00000220411 491 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 AC159635.1-201ENSMUST00000220905 2102 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 AC123920.1-201ENSMUST00000221449 384 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim35Q8C006 AC133598.2-201ENSMUST00000224302 624 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Plac8-201ENSMUST00000031264 744 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim35Q8C006 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Trim35Q8C006 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Trim35Q8C006 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Trim35Q8C006 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim35Q8C006 Gm44014-201ENSMUST00000205150 1509 ntBASIC8.19□□□□□ -1.1
Trim35Q8C006 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim35Q8C006 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim35Q8C006 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim35Q8C006 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm42519-201ENSMUST00000199282 3656 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 Tktl1-201ENSMUST00000010127 2473 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim35Q8C006 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm37496-201ENSMUST00000191930 2509 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm7853-201ENSMUST00000100708 478 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm22760-201ENSMUST00000102277 93 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm14296-202ENSMUST00000108931 750 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm5915-201ENSMUST00000116136 454 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm14163-201ENSMUST00000117342 217 ntBASIC8.18□□□□□ -1.1
Trim35Q8C006 Gm7746-201ENSMUST00000120966 503 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms