Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm43557-201ENSMUST00000197100 2370 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm42685-201ENSMUST00000200378 2390 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm38387-201ENSMUST00000191945 2577 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm26489-201ENSMUST00000157880 264 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm24179-201ENSMUST00000158925 127 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm16290-201ENSMUST00000161175 474 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm23632-201ENSMUST00000175289 125 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm24415-201ENSMUST00000180218 107 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm27640-201ENSMUST00000184580 147 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm21088-201ENSMUST00000190875 316 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm17981-201ENSMUST00000191109 739 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm36891-201ENSMUST00000191995 655 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm44468-201ENSMUST00000199516 105 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm7838-201ENSMUST00000203221 1189 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm43892-201ENSMUST00000204373 265 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm18592-201ENSMUST00000221529 276 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 AC164618.1-201ENSMUST00000225769 592 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm23330-201ENSMUST00000082660 164 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm42658-201ENSMUST00000197199 1575 ntBASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim41Q5NCC3 Gm37959-201ENSMUST00000191700 2897 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm5702-201ENSMUST00000185629 2469 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 CT025535.2-201ENSMUST00000228572 7441 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm6923-201ENSMUST00000118343 406 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm12229-201ENSMUST00000120487 468 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm26037-201ENSMUST00000158150 311 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm22911-201ENSMUST00000177920 107 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Mir3473e-201ENSMUST00000183932 110 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm8458-201ENSMUST00000196658 819 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm43669-201ENSMUST00000198229 436 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm18850-201ENSMUST00000211578 388 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm46146-201ENSMUST00000217483 346 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 AC116591.1-201ENSMUST00000227919 351 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm37945-201ENSMUST00000192536 4367 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Gm42763-201ENSMUST00000199595 2087 ntBASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim41Q5NCC3 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trim41Q5NCC3 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Gm44424-201ENSMUST00000203438 1826 ntBASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Gm15560-201ENSMUST00000117107 643 ntBASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Gm7485-201ENSMUST00000119502 1109 ntBASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Gm22216-201ENSMUST00000157557 114 ntBASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Gm27342-201ENSMUST00000183530 109 ntBASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Gm2436-201ENSMUST00000219562 774 ntBASIC11.33□□□□□ -0.6
Trim41Q5NCC3 AC153548.2-201ENSMUST00000219770 885 ntBASIC11.33□□□□□ -0.6
Trim41Q5NCC3 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms