Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Upf3bQ3ULL6 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm14995-201ENSMUST00000117135 391 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm12423-201ENSMUST00000118334 135 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm13484-201ENSMUST00000120738 412 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm22343-201ENSMUST00000122648 286 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm23534-201ENSMUST00000157539 97 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm22698-201ENSMUST00000175375 108 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm28769-201ENSMUST00000190176 615 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm43418-201ENSMUST00000201334 428 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm45185-201ENSMUST00000207556 404 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm45733-201ENSMUST00000212988 437 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm5045-201ENSMUST00000027054 810 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Upf3bQ3ULL6 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gm16254-201ENSMUST00000131528 730 ntBASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gm4617-201ENSMUST00000178993 331 ntBASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gm27551-201ENSMUST00000184258 77 ntBASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gm29596-201ENSMUST00000185710 385 ntBASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gm43717-201ENSMUST00000198684 310 ntBASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gm23796-201ENSMUST00000084011 160 ntBASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Upf3bQ3ULL6 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm11409-201ENSMUST00000118621 403 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm12752-201ENSMUST00000121657 811 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms