Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Spg11Q3UHA3 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
Spg11Q3UHA3 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Spg11Q3UHA3 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Spg11Q3UHA3 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
Spg11Q3UHA3 AC141476.1-201ENSMUST00000224988 3387 ntBASIC4.61□□□□□ -1.67
Spg11Q3UHA3 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Spg11Q3UHA3 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.61□□□□□ -1.67
Spg11Q3UHA3 Gm38011-201ENSMUST00000193312 279 ntBASIC4.61□□□□□ -1.67
Spg11Q3UHA3 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.61□□□□□ -1.67
Spg11Q3UHA3 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.61□□□□□ -1.67
Spg11Q3UHA3 Gm6104-201ENSMUST00000078030 603 ntBASIC4.61□□□□□ -1.67
Spg11Q3UHA3 Snora7a-201ENSMUST00000082629 140 ntBASIC4.61□□□□□ -1.67
Spg11Q3UHA3 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
Spg11Q3UHA3 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Spg11Q3UHA3 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm37183-201ENSMUST00000191712 3405 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm22590-201ENSMUST00000104247 128 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm24376-201ENSMUST00000104399 127 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm6673-201ENSMUST00000166114 700 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 AC155923.1-201ENSMUST00000215676 356 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm42496-201ENSMUST00000197976 3241 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm26418-201ENSMUST00000104275 137 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm24608-201ENSMUST00000104381 136 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm12231-201ENSMUST00000119447 695 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm13363-201ENSMUST00000122008 522 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm22718-201ENSMUST00000122701 315 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm24998-201ENSMUST00000157908 89 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm7634-201ENSMUST00000185778 553 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm45574-201ENSMUST00000210921 331 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 n-R5s65-201ENSMUST00000082614 117 ntBASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Spg11Q3UHA3 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Gm20768-201ENSMUST00000199527 2338 ntBASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Gm6011-201ENSMUST00000211736 1796 ntBASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Gm14909-201ENSMUST00000117853 351 ntBASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Gm25999-201ENSMUST00000175398 133 ntBASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Gm29228-201ENSMUST00000185489 418 ntBASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Gm28314-201ENSMUST00000191276 345 ntBASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 AC124732.4-201ENSMUST00000220930 1274 ntBASIC4.59□□□□□ -1.67
Spg11Q3UHA3 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Spg11Q3UHA3 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
Spg11Q3UHA3 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms