Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm28468-201ENSMUST00000188536 615 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm37631-201ENSMUST00000192275 364 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm37070-201ENSMUST00000193272 460 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm9442-201ENSMUST00000194242 319 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm21041-201ENSMUST00000214829 823 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm23514-201ENSMUST00000082827 130 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trafd1Q3UDK1 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Trafd1Q3UDK1 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Trafd1Q3UDK1 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
Trafd1Q3UDK1 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
Trafd1Q3UDK1 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gm43164-201ENSMUST00000202529 2128 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Mir290a-201ENSMUST00000104627 83 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gm12931-201ENSMUST00000117046 324 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gm25714-201ENSMUST00000158626 296 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Mir6400-201ENSMUST00000184870 92 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gm18117-201ENSMUST00000187720 742 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gm9173-201ENSMUST00000198054 400 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gm43968-201ENSMUST00000203388 389 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gm8999-201ENSMUST00000204951 969 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gm19196-201ENSMUST00000209258 357 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Trafd1Q3UDK1 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Gm5844-201ENSMUST00000119417 2191 ntBASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Gm13033-201ENSMUST00000117591 1057 ntBASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Gm15057-201ENSMUST00000121516 534 ntBASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Gm23537-201ENSMUST00000157536 330 ntBASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Gm16107-201ENSMUST00000162523 862 ntBASIC4.95□□□□□ -1.62
Trafd1Q3UDK1 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms