Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC8□□□□□ -1.13
Col17a1Q07563 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col17a1Q07563 Gm15840-201ENSMUST00000122099 943 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC8□□□□□ -1.13
Col17a1Q07563 Gm5924-201ENSMUST00000132554 871 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Gm24505-201ENSMUST00000157682 126 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col17a1Q07563 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col17a1Q07563 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC8□□□□□ -1.13
Col17a1Q07563 Gm25817-201ENSMUST00000177758 121 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Gm24766-201ENSMUST00000179182 121 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Col17a1Q07563 Gm8498-201ENSMUST00000188227 974 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Gm10292-202ENSMUST00000193165 585 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Gm18330-201ENSMUST00000199246 547 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Gm5027-201ENSMUST00000206700 375 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC8□□□□□ -1.13
Col17a1Q07563 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC8□□□□□ -1.13
Col17a1Q07563 AC125464.1-201ENSMUST00000228013 512 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Col17a1Q07563 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col17a1Q07563 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col17a1Q07563 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Col17a1Q07563 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col17a1Q07563 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Col17a1Q07563 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC8□□□□□ -1.13
Col17a1Q07563 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col17a1Q07563 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC8□□□□□ -1.13
Col17a1Q07563 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col17a1Q07563 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col17a1Q07563 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Col17a1Q07563 Gm43022-201ENSMUST00000197067 4268 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Gm23577-201ENSMUST00000103950 110 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col17a1Q07563 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Gm8202-201ENSMUST00000117682 310 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Gm14750-201ENSMUST00000118262 516 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Mup-ps10-201ENSMUST00000119626 556 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col17a1Q07563 Mir3471-2-201ENSMUST00000174896 102 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC8□□□□□ -1.13
Col17a1Q07563 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC8□□□□□ -1.13
Col17a1Q07563 Gm43894-201ENSMUST00000203274 688 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC8□□□□□ -1.13
Col17a1Q07563 AC192616.3-201ENSMUST00000220797 1124 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Gm46998-201ENSMUST00000221444 330 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC8□□□□□ -1.13
Col17a1Q07563 AC141425.1-201ENSMUST00000224989 265 ntBASIC8□□□□□ -1.13
Col17a1Q07563 AC164437.2-201ENSMUST00000228915 797 ntBASIC8□□□□□ -1.13
Col17a1Q07563 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Col17a1Q07563 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Col17a1Q07563 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col17a1Q07563 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC7.99□□□□□ -1.13
Col17a1Q07563 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col17a1Q07563 Gm45263-201ENSMUST00000210377 1375 ntBASIC7.99□□□□□ -1.13
Col17a1Q07563 Gm43426-201ENSMUST00000197287 2597 ntBASIC7.99□□□□□ -1.13
Col17a1Q07563 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Col17a1Q07563 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col17a1Q07563 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC7.99□□□□□ -1.13
Col17a1Q07563 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col17a1Q07563 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col17a1Q07563 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col17a1Q07563 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col17a1Q07563 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Col17a1Q07563 Gm14909-201ENSMUST00000117853 351 ntBASIC7.99□□□□□ -1.13
Col17a1Q07563 Gm23279-201ENSMUST00000157912 97 ntBASIC7.99□□□□□ -1.13
Col17a1Q07563 Gm37599-201ENSMUST00000193067 489 ntBASIC7.99□□□□□ -1.13
Col17a1Q07563 Gm9023-201ENSMUST00000198408 1038 ntBASIC7.99□□□□□ -1.13
Col17a1Q07563 Gm8703-201ENSMUST00000203793 730 ntBASIC7.99□□□□□ -1.13
Col17a1Q07563 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC7.99□□□□□ -1.13
Col17a1Q07563 AC115357.1-201ENSMUST00000227575 466 ntBASIC7.99□□□□□ -1.13
Col17a1Q07563 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Col17a1Q07563 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Col17a1Q07563 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Col17a1Q07563 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Col17a1Q07563 Gm42717-201ENSMUST00000197309 3463 ntBASIC7.99□□□□□ -1.13
Col17a1Q07563 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Col17a1Q07563 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Col17a1Q07563 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
Col17a1Q07563 AC160029.1-201ENSMUST00000219628 2678 ntBASIC7.98□□□□□ -1.13
Col17a1Q07563 Gm38198-201ENSMUST00000191772 3581 ntBASIC7.98□□□□□ -1.13
Col17a1Q07563 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Col17a1Q07563 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col17a1Q07563 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Col17a1Q07563 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col17a1Q07563 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Col17a1Q07563 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col17a1Q07563 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col17a1Q07563 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col17a1Q07563 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Col17a1Q07563 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col17a1Q07563 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC7.98□□□□□ -1.13
Col17a1Q07563 Gm15740-201ENSMUST00000159703 1292 ntBASIC7.98□□□□□ -1.13
Col17a1Q07563 Gm5066-201ENSMUST00000188479 822 ntBASIC7.98□□□□□ -1.13
Col17a1Q07563 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col17a1Q07563 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC7.98□□□□□ -1.13
Col17a1Q07563 Gm45523-201ENSMUST00000210712 799 ntBASIC7.98□□□□□ -1.13
Col17a1Q07563 AC161250.1-201ENSMUST00000213426 1111 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms