Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Gm14710-201ENSMUST00000146082 1066 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Gm10513-201ENSMUST00000194203 6468 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PrkdcP97313 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Gm7988-201ENSMUST00000196623 2297 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PrkdcP97313 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PrkdcP97313 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC3.28□□□□□ -1.88
PrkdcP97313 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Gm23837-201ENSMUST00000122656 286 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Gm38234-201ENSMUST00000195204 421 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Gm42830-201ENSMUST00000196642 313 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC3.28□□□□□ -1.88
PrkdcP97313 Gm45523-201ENSMUST00000210712 799 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Gm39197-201ENSMUST00000212069 457 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 AC137127.3-201ENSMUST00000213340 349 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.28□□□□□ -1.88
PrkdcP97313 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PrkdcP97313 Ep400-203ENSMUST00000112435 10420 ntTSL 5 BASIC3.28□□□□□ -1.88
PrkdcP97313 Gm37514-201ENSMUST00000194512 2753 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
PrkdcP97313 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
PrkdcP97313 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
PrkdcP97313 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
PrkdcP97313 AC122263.1-201ENSMUST00000228636 2805 ntBASIC3.28□□□□□ -1.89
PrkdcP97313 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
PrkdcP97313 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC3.28□□□□□ -1.89
PrkdcP97313 Gm37780-201ENSMUST00000194117 1873 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PrkdcP97313 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
PrkdcP97313 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC3.27□□□□□ -1.89
PrkdcP97313 Gm10292-201ENSMUST00000183142 581 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Dlx6os1-204ENSMUST00000184182 146 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC3.27□□□□□ -1.89
PrkdcP97313 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.27□□□□□ -1.89
PrkdcP97313 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PrkdcP97313 Mir132-201ENSMUST00000083603 66 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC3.27□□□□□ -1.89
PrkdcP97313 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC3.27□□□□□ -1.89
PrkdcP97313 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
PrkdcP97313 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
PrkdcP97313 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PrkdcP97313 Gm23782-201ENSMUST00000157939 120 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Gm22536-201ENSMUST00000158171 134 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Mir6917-201ENSMUST00000184111 61 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Gm21654-201ENSMUST00000188086 691 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Gm37073-201ENSMUST00000192469 1222 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Gm38185-201ENSMUST00000193195 694 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PrkdcP97313 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC3.27□□□□□ -1.89
PrkdcP97313 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Gm43462-201ENSMUST00000200265 3648 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC3.27□□□□□ -1.89
PrkdcP97313 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
PrkdcP97313 Gm42994-201ENSMUST00000195964 2549 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PrkdcP97313 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Gm23577-201ENSMUST00000103950 110 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Gm13250-201ENSMUST00000117209 753 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.27□□□□□ -1.89
PrkdcP97313 Gm22718-201ENSMUST00000122701 315 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Gm22804-201ENSMUST00000158052 101 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Gm45392-201ENSMUST00000210441 214 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
PrkdcP97313 Gm37084-201ENSMUST00000191688 5898 ntBASIC3.27□□□□□ -1.89
PrkdcP97313 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PrkdcP97313 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PrkdcP97313 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PrkdcP97313 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PrkdcP97313 Snora64-201ENSMUST00000104521 134 ntBASIC3.26□□□□□ -1.89
PrkdcP97313 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms