Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb1P63158 Gm24155-201ENSMUST00000175259 110 ntBASIC6.34□□□□□ -1.39
Hmgb1P63158 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb1P63158 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb1P63158 Gm25065-201ENSMUST00000177914 132 ntBASIC6.34□□□□□ -1.39
Hmgb1P63158 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb1P63158 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb1P63158 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb1P63158 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Hmgb1P63158 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb1P63158 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb1P63158 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb1P63158 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Hmgb1P63158 Gm25891-201ENSMUST00000180050 132 ntBASIC6.34□□□□□ -1.39
Hmgb1P63158 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb1P63158 Gm8183-201ENSMUST00000183134 980 ntBASIC6.34□□□□□ -1.39
Hmgb1P63158 Mir6393-201ENSMUST00000183709 94 ntBASIC6.34□□□□□ -1.39
Hmgb1P63158 Gm9569-201ENSMUST00000187492 787 ntBASIC6.34□□□□□ -1.39
Hmgb1P63158 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.34□□□□□ -1.39
Hmgb1P63158 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.34□□□□□ -1.39
Hmgb1P63158 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb1P63158 Gm34768-201ENSMUST00000193884 565 ntBASIC6.34□□□□□ -1.39
Hmgb1P63158 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.34□□□□□ -1.39
Hmgb1P63158 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb1P63158 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC6.34□□□□□ -1.39
Hmgb1P63158 Gm44538-201ENSMUST00000205615 348 ntBASIC6.34□□□□□ -1.39
Hmgb1P63158 Gm44892-201ENSMUST00000208595 488 ntBASIC6.34□□□□□ -1.39
Hmgb1P63158 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.34□□□□□ -1.39
Hmgb1P63158 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.34□□□□□ -1.39
Hmgb1P63158 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.34□□□□□ -1.39
Hmgb1P63158 AV026068-231ENSMUST00000225862 482 ntBASIC6.34□□□□□ -1.39
Hmgb1P63158 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.34□□□□□ -1.39
Hmgb1P63158 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb1P63158 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb1P63158 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Hmgb1P63158 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb1P63158 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Hmgb1P63158 Gm22043-201ENSMUST00000082993 158 ntBASIC6.34□□□□□ -1.39
Hmgb1P63158 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Hmgb1P63158 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.34□□□□□ -1.39
Hmgb1P63158 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.34□□□□□ -1.39
Hmgb1P63158 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb1P63158 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Hmgb1P63158 AC153881.3-201ENSMUST00000218494 1561 ntBASIC6.34□□□□□ -1.39
Hmgb1P63158 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Hmgb1P63158 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Hmgb1P63158 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.34□□□□□ -1.4
Hmgb1P63158 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
Hmgb1P63158 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.34□□□□□ -1.4
Hmgb1P63158 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Hmgb1P63158 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Hmgb1P63158 Gm27013-202ENSMUST00000205067 1436 ntBASIC6.33□□□□□ -1.4
Hmgb1P63158 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb1P63158 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb1P63158 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb1P63158 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb1P63158 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Hmgb1P63158 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.33□□□□□ -1.4
Hmgb1P63158 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Hmgb1P63158 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Hmgb1P63158 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.33□□□□□ -1.4
Hmgb1P63158 Gm16053-201ENSMUST00000120511 188 ntBASIC6.33□□□□□ -1.4
Hmgb1P63158 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb1P63158 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.33□□□□□ -1.4
Hmgb1P63158 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Hmgb1P63158 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC6.33□□□□□ -1.4
Hmgb1P63158 Gm43762-201ENSMUST00000201521 295 ntBASIC6.33□□□□□ -1.4
Hmgb1P63158 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC6.33□□□□□ -1.4
Hmgb1P63158 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC6.33□□□□□ -1.4
Hmgb1P63158 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.33□□□□□ -1.4
Hmgb1P63158 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.33□□□□□ -1.4
Hmgb1P63158 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb1P63158 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC6.33□□□□□ -1.4
Hmgb1P63158 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.33□□□□□ -1.4
Hmgb1P63158 AC158511.1-201ENSMUST00000223622 764 ntBASIC6.33□□□□□ -1.4
Hmgb1P63158 CT033778.1-201ENSMUST00000224767 767 ntBASIC6.33□□□□□ -1.4
Hmgb1P63158 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.33□□□□□ -1.4
Hmgb1P63158 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms