Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
NcanP55066 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.51□□□□□ -1.53
NcanP55066 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NcanP55066 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NcanP55066 Gm23593-201ENSMUST00000104309 120 ntBASIC5.51□□□□□ -1.53
NcanP55066 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NcanP55066 Gm14659-201ENSMUST00000117667 843 ntBASIC5.51□□□□□ -1.53
NcanP55066 Gm7312-201ENSMUST00000118798 469 ntBASIC5.51□□□□□ -1.53
NcanP55066 Gm6079-201ENSMUST00000121356 404 ntBASIC5.51□□□□□ -1.53
NcanP55066 Gm12094-201ENSMUST00000121781 472 ntBASIC5.51□□□□□ -1.53
NcanP55066 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.51□□□□□ -1.53
NcanP55066 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 Gm6647-201ENSMUST00000170514 641 ntBASIC5.51□□□□□ -1.53
NcanP55066 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.51□□□□□ -1.53
NcanP55066 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC5.51□□□□□ -1.53
NcanP55066 Gm2497-201ENSMUST00000189539 601 ntBASIC5.51□□□□□ -1.53
NcanP55066 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC5.51□□□□□ -1.53
NcanP55066 Gm37503-201ENSMUST00000192088 319 ntBASIC5.51□□□□□ -1.53
NcanP55066 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.51□□□□□ -1.53
NcanP55066 Gm5285-201ENSMUST00000193089 666 ntBASIC5.51□□□□□ -1.53
NcanP55066 Gm43370-201ENSMUST00000196437 284 ntBASIC5.51□□□□□ -1.53
NcanP55066 Gm43814-201ENSMUST00000197851 413 ntBASIC5.51□□□□□ -1.53
NcanP55066 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC5.51□□□□□ -1.53
NcanP55066 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC5.51□□□□□ -1.53
NcanP55066 Gm44234-201ENSMUST00000204246 900 ntBASIC5.51□□□□□ -1.53
NcanP55066 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.51□□□□□ -1.53
NcanP55066 Gm9685-201ENSMUST00000211275 538 ntBASIC5.51□□□□□ -1.53
NcanP55066 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.51□□□□□ -1.53
NcanP55066 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.51□□□□□ -1.53
NcanP55066 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.51□□□□□ -1.53
NcanP55066 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
NcanP55066 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.51□□□□□ -1.53
NcanP55066 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.51□□□□□ -1.53
NcanP55066 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC5.51□□□□□ -1.53
NcanP55066 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NcanP55066 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.51□□□□□ -1.53
NcanP55066 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NcanP55066 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.5□□□□□ -1.53
NcanP55066 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
NcanP55066 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NcanP55066 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
NcanP55066 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NcanP55066 Gm11914-201ENSMUST00000117094 507 ntBASIC5.5□□□□□ -1.53
NcanP55066 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.5□□□□□ -1.53
NcanP55066 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
NcanP55066 Gm24186-201ENSMUST00000157983 127 ntBASIC5.5□□□□□ -1.53
NcanP55066 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NcanP55066 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.5□□□□□ -1.53
NcanP55066 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NcanP55066 Gm19791-201ENSMUST00000180398 859 ntBASIC5.5□□□□□ -1.53
NcanP55066 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.5□□□□□ -1.53
NcanP55066 Gm44134-202ENSMUST00000204777 545 ntBASIC5.5□□□□□ -1.53
NcanP55066 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.5□□□□□ -1.53
NcanP55066 Gm45246-201ENSMUST00000210820 367 ntBASIC5.5□□□□□ -1.53
NcanP55066 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC5.5□□□□□ -1.53
NcanP55066 Gm7439-201ENSMUST00000214053 835 ntBASIC5.5□□□□□ -1.53
NcanP55066 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.5□□□□□ -1.53
NcanP55066 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.5□□□□□ -1.53
NcanP55066 AC158536.1-201ENSMUST00000222510 256 ntBASIC5.5□□□□□ -1.53
NcanP55066 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.5□□□□□ -1.53
NcanP55066 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NcanP55066 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.5□□□□□ -1.53
NcanP55066 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.5□□□□□ -1.53
NcanP55066 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NcanP55066 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5.5□□□□□ -1.53
NcanP55066 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.5□□□□□ -1.53
NcanP55066 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.5□□□□□ -1.53
NcanP55066 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NcanP55066 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NcanP55066 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.5□□□□□ -1.53
NcanP55066 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
NcanP55066 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NcanP55066 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.5□□□□□ -1.53
NcanP55066 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.5□□□□□ -1.53
NcanP55066 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NcanP55066 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NcanP55066 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.49□□□□□ -1.53
NcanP55066 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
NcanP55066 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NcanP55066 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
NcanP55066 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.49□□□□□ -1.53
NcanP55066 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.49□□□□□ -1.53
NcanP55066 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NcanP55066 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NcanP55066 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NcanP55066 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NcanP55066 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms