Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm10136-201ENSMUST00000183196 435 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm37095-201ENSMUST00000195421 205 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm25617-202ENSMUST00000198387 132 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC7.2□□□□□ -1.26
Rfx1P48377 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm18600-201ENSMUST00000207205 505 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm30646-201ENSMUST00000207662 180 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm18597-201ENSMUST00000209519 694 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC7.2□□□□□ -1.26
Rfx1P48377 Gm31711-201ENSMUST00000220687 196 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC7.2□□□□□ -1.26
Rfx1P48377 CT030166.1-201ENSMUST00000222654 357 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm9267-201ENSMUST00000222831 404 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 AC164618.3-201ENSMUST00000224863 681 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 AC164116.1-201ENSMUST00000225810 622 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 AC170810.3-201ENSMUST00000226177 374 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 AC166344.2-201ENSMUST00000226747 374 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm12582-201ENSMUST00000030555 697 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Gm9985-201ENSMUST00000044101 510 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Rfx1P48377 Gm10108-201ENSMUST00000078246 319 ntBASIC7.2□□□□□ -1.26
Rfx1P48377 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Rfx1P48377 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
Rfx1P48377 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Rfx1P48377 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC7.2□□□□□ -1.26
Rfx1P48377 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Rfx1P48377 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Rfx1P48377 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC7.2□□□□□ -1.26
Rfx1P48377 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
Rfx1P48377 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
Rfx1P48377 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC7.2□□□□□ -1.26
Rfx1P48377 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Rfx1P48377 Gm44901-201ENSMUST00000208157 3977 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Rfx1P48377 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Rfx1P48377 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC7.19□□□□□ -1.26
Rfx1P48377 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Rfx1P48377 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC7.19□□□□□ -1.26
Rfx1P48377 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Rfx1P48377 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Rfx1P48377 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Rfx1P48377 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC7.19□□□□□ -1.26
Rfx1P48377 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
Rfx1P48377 Gm14607-201ENSMUST00000119119 491 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Rfx1P48377 Gm11876-201ENSMUST00000120002 269 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Gm13735-201ENSMUST00000120217 670 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Gm16100-201ENSMUST00000120489 231 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Rfx1P48377 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Rfx1P48377 Mir1945-201ENSMUST00000157919 78 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Gm15974-201ENSMUST00000159103 531 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC7.19□□□□□ -1.26
Rfx1P48377 Gm3140-201ENSMUST00000163523 481 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC7.19□□□□□ -1.26
Rfx1P48377 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC7.19□□□□□ -1.26
Rfx1P48377 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Rfx1P48377 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Rfx1P48377 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC7.19□□□□□ -1.26
Rfx1P48377 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC7.19□□□□□ -1.26
Rfx1P48377 Gm17934-201ENSMUST00000192818 422 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Gm18452-201ENSMUST00000202968 1111 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Gm18805-201ENSMUST00000206872 655 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Rfx1P48377 Gm45626-201ENSMUST00000210093 361 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Gm8125-201ENSMUST00000216602 738 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 AC153852.1-201ENSMUST00000217881 567 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.19□□□□□ -1.26
Rfx1P48377 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Rfx1P48377 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Rfx1P48377 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Rfx1P48377 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Rfx1P48377 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Rfx1P48377 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Rfx1P48377 Gm22287-201ENSMUST00000083197 107 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Rfx1P48377 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Rfx1P48377 Gm37238-201ENSMUST00000195552 2390 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC7.19□□□□□ -1.26
Rfx1P48377 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Rfx1P48377 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.19□□□□□ -1.26
Rfx1P48377 Gm7155-201ENSMUST00000121143 1671 ntBASIC7.19□□□□□ -1.26
Rfx1P48377 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Rfx1P48377 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Rfx1P48377 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Rfx1P48377 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Rfx1P48377 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC7.18□□□□□ -1.26
Rfx1P48377 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Rfx1P48377 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Rfx1P48377 Gm23979-201ENSMUST00000104071 128 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Rfx1P48377 Gm13614-201ENSMUST00000117306 503 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm6893-201ENSMUST00000118385 522 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm15443-201ENSMUST00000118947 820 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm13574-201ENSMUST00000120482 394 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm13743-201ENSMUST00000121486 724 ntBASIC7.18□□□□□ -1.26
Rfx1P48377 Gm15696-201ENSMUST00000121730 445 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms