Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col18a1P39061 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col18a1P39061 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC7.1□□□□□ -1.27
Col18a1P39061 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Gm27564-201ENSMUST00000185196 96 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col18a1P39061 Gm29196-201ENSMUST00000189239 618 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Gm18296-201ENSMUST00000192475 783 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Mir703-201ENSMUST00000197105 109 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Gm42776-201ENSMUST00000198031 406 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC7.1□□□□□ -1.27
Col18a1P39061 Gm7639-201ENSMUST00000212608 484 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 AC159622.1-201ENSMUST00000221004 554 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 AC156790.3-201ENSMUST00000226200 254 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 CT030662.1-201ENSMUST00000227380 232 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col18a1P39061 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Col18a1P39061 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col18a1P39061 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col18a1P39061 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col18a1P39061 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col18a1P39061 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Col18a1P39061 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col18a1P39061 Gm37051-201ENSMUST00000194535 2943 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC7.1□□□□□ -1.27
Col18a1P39061 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col18a1P39061 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Gm37902-201ENSMUST00000192839 1683 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col18a1P39061 Gm15791-201ENSMUST00000120365 319 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
Col18a1P39061 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Col18a1P39061 Gm25913-201ENSMUST00000157617 135 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Gm24724-201ENSMUST00000158230 107 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Gm23819-201ENSMUST00000158744 109 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Col18a1P39061 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col18a1P39061 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col18a1P39061 Gm20673-201ENSMUST00000177167 430 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Gm37632-201ENSMUST00000191811 1142 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col18a1P39061 Gm44988-201ENSMUST00000203835 1161 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Gm9685-201ENSMUST00000211275 538 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Gm18039-201ENSMUST00000217816 728 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 AC154305.3-201ENSMUST00000224661 552 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 CT572983.1-201ENSMUST00000226895 514 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 AC163295.1-201ENSMUST00000227840 314 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 AC125523.1-201ENSMUST00000228018 934 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col18a1P39061 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col18a1P39061 Gm10780-201ENSMUST00000099459 285 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col18a1P39061 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Col18a1P39061 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col18a1P39061 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
Col18a1P39061 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Gm42662-201ENSMUST00000202539 1431 ntBASIC7.1□□□□□ -1.27
Col18a1P39061 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col18a1P39061 AC124183.1-201ENSMUST00000222367 2135 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col18a1P39061 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col18a1P39061 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Col18a1P39061 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col18a1P39061 Gm42876-201ENSMUST00000196989 3215 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Col18a1P39061 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 Gm42536-201ENSMUST00000197562 1613 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 Gm24340-201ENSMUST00000104208 97 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 Gm12294-201ENSMUST00000119723 490 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 Gm15388-201ENSMUST00000121578 726 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Col18a1P39061 Gm20462-201ENSMUST00000172623 408 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 Gm6155-201ENSMUST00000173735 341 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 Gm26092-201ENSMUST00000179798 97 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 Mir669a-1-201ENSMUST00000180238 97 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 Mir1957b-201ENSMUST00000184608 123 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col18a1P39061 Gm29161-201ENSMUST00000188250 699 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC7.09□□□□□ -1.27
Col18a1P39061 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col18a1P39061 AC124420.1-201ENSMUST00000219779 791 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 AC123061.2-201ENSMUST00000226234 802 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 Gm43361-201ENSMUST00000196562 4690 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 AC154640.4-201ENSMUST00000226647 4640 ntBASIC7.09□□□□□ -1.27
Col18a1P39061 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col18a1P39061 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Col18a1P39061 Gm38198-201ENSMUST00000191772 3581 ntBASIC7.09□□□□□ -1.28
Col18a1P39061 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm23273-201ENSMUST00000104058 135 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm11987-201ENSMUST00000118524 381 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm13502-201ENSMUST00000121574 684 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm9890-201ENSMUST00000171867 537 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms