Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.77□□□□□ -1.49
Col1a1P11087 AC114573.1-201ENSMUST00000224120 1210 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Snord22-201ENSMUST00000083153 126 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col1a1P11087 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col1a1P11087 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col1a1P11087 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col1a1P11087 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Col1a1P11087 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col1a1P11087 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col1a1P11087 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.76□□□□□ -1.49
Col1a1P11087 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col1a1P11087 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col1a1P11087 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col1a1P11087 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Col1a1P11087 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col1a1P11087 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col1a1P11087 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col1a1P11087 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col1a1P11087 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.76□□□□□ -1.49
Col1a1P11087 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col1a1P11087 Gm23178-201ENSMUST00000116782 95 ntBASIC5.76□□□□□ -1.49
Col1a1P11087 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.76□□□□□ -1.49
Col1a1P11087 Gm11510-201ENSMUST00000120278 347 ntBASIC5.76□□□□□ -1.49
Col1a1P11087 Gm13867-201ENSMUST00000120844 395 ntBASIC5.76□□□□□ -1.49
Col1a1P11087 Gm14908-201ENSMUST00000120930 1286 ntBASIC5.76□□□□□ -1.49
Col1a1P11087 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.76□□□□□ -1.49
Col1a1P11087 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC5.76□□□□□ -1.49
Col1a1P11087 Gm27414-201ENSMUST00000185033 381 ntBASIC5.76□□□□□ -1.49
Col1a1P11087 Gm37243-201ENSMUST00000193407 595 ntBASIC5.76□□□□□ -1.49
Col1a1P11087 Gm44816-201ENSMUST00000206666 477 ntBASIC5.76□□□□□ -1.49
Col1a1P11087 Gm33626-201ENSMUST00000206790 828 ntBASIC5.76□□□□□ -1.49
Col1a1P11087 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.76□□□□□ -1.49
Col1a1P11087 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col1a1P11087 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col1a1P11087 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col1a1P11087 AC125487.2-201ENSMUST00000219810 1300 ntBASIC5.76□□□□□ -1.49
Col1a1P11087 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.76□□□□□ -1.49
Col1a1P11087 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col1a1P11087 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col1a1P11087 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col1a1P11087 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.75□□□□□ -1.49
Col1a1P11087 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.75□□□□□ -1.49
Col1a1P11087 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.75□□□□□ -1.49
Col1a1P11087 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col1a1P11087 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col1a1P11087 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col1a1P11087 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col1a1P11087 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col1a1P11087 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.75□□□□□ -1.49
Col1a1P11087 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col1a1P11087 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
Col1a1P11087 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col1a1P11087 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
Col1a1P11087 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col1a1P11087 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.75□□□□□ -1.49
Col1a1P11087 Gm13172-201ENSMUST00000118685 256 ntBASIC5.75□□□□□ -1.49
Col1a1P11087 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.75□□□□□ -1.49
Col1a1P11087 Gm22211-201ENSMUST00000158097 156 ntBASIC5.75□□□□□ -1.49
Col1a1P11087 Gm27883-201ENSMUST00000183941 102 ntBASIC5.75□□□□□ -1.49
Col1a1P11087 Gm9569-201ENSMUST00000187492 787 ntBASIC5.75□□□□□ -1.49
Col1a1P11087 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.75□□□□□ -1.49
Col1a1P11087 Gm37492-201ENSMUST00000191948 376 ntBASIC5.75□□□□□ -1.49
Col1a1P11087 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.75□□□□□ -1.49
Col1a1P11087 Gm45081-201ENSMUST00000206281 572 ntBASIC5.75□□□□□ -1.49
Col1a1P11087 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.75□□□□□ -1.49
Col1a1P11087 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.75□□□□□ -1.49
Col1a1P11087 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.75□□□□□ -1.49
Col1a1P11087 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col1a1P11087 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col1a1P11087 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col1a1P11087 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col1a1P11087 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col1a1P11087 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.75□□□□□ -1.49
Col1a1P11087 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col1a1P11087 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col1a1P11087 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col1a1P11087 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.74□□□□□ -1.49
Col1a1P11087 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col1a1P11087 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.74□□□□□ -1.49
Col1a1P11087 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.74□□□□□ -1.49
Col1a1P11087 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col1a1P11087 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col1a1P11087 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col1a1P11087 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col1a1P11087 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
Col1a1P11087 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC5.74□□□□□ -1.49
Col1a1P11087 Gm11409-201ENSMUST00000118621 403 ntBASIC5.74□□□□□ -1.49
Col1a1P11087 Gm12231-201ENSMUST00000119447 695 ntBASIC5.74□□□□□ -1.49
Col1a1P11087 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col1a1P11087 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col1a1P11087 Gm27805-201ENSMUST00000184513 79 ntBASIC5.74□□□□□ -1.49
Col1a1P11087 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col1a1P11087 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.74□□□□□ -1.49
Col1a1P11087 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.74□□□□□ -1.49
Col1a1P11087 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Col1a1P11087 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col1a1P11087 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Col1a1P11087 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms