Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Lsm1Q8VC85 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Lsm1Q8VC85 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC4.85□□□□□ -1.63
Lsm1Q8VC85 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC4.85□□□□□ -1.63
Lsm1Q8VC85 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Lsm1Q8VC85 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Lsm1Q8VC85 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.85□□□□□ -1.63
Lsm1Q8VC85 Gm43845-201ENSMUST00000202462 1820 ntBASIC4.85□□□□□ -1.63
Lsm1Q8VC85 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.85□□□□□ -1.63
Lsm1Q8VC85 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.85□□□□□ -1.63
Lsm1Q8VC85 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Lsm1Q8VC85 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Lsm1Q8VC85 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Lsm1Q8VC85 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.85□□□□□ -1.63
Lsm1Q8VC85 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Lsm1Q8VC85 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm24789-201ENSMUST00000104282 131 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Mir879-201ENSMUST00000104703 76 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm12332-201ENSMUST00000121397 922 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm22514-201ENSMUST00000122547 308 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm24383-201ENSMUST00000122691 333 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm2182-201ENSMUST00000145243 663 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm16456-201ENSMUST00000174431 920 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm18828-202ENSMUST00000181035 310 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm42694-201ENSMUST00000196951 358 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm2142-201ENSMUST00000197899 589 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm21041-201ENSMUST00000214829 823 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 AC123832.2-201ENSMUST00000215151 129 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 AC154450.1-201ENSMUST00000220911 485 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm6562-201ENSMUST00000221903 464 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 CT025579.3-201ENSMUST00000224543 451 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lsm1Q8VC85 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.84□□□□□ -1.63
Lsm1Q8VC85 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.84□□□□□ -1.64
Lsm1Q8VC85 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Lsm1Q8VC85 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
Lsm1Q8VC85 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Gm13787-201ENSMUST00000120422 168 ntBASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Gm25660-201ENSMUST00000158470 104 ntBASIC4.83□□□□□ -1.64
Lsm1Q8VC85 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Gm8837-201ENSMUST00000161037 1107 ntBASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Gm26925-201ENSMUST00000182470 957 ntBASIC4.83□□□□□ -1.64
Lsm1Q8VC85 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Gm8241-201ENSMUST00000189286 816 ntBASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Gm9134-201ENSMUST00000193186 551 ntBASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Gm18952-201ENSMUST00000194471 846 ntBASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Gm33952-201ENSMUST00000197795 408 ntBASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Gm2623-201ENSMUST00000199229 286 ntBASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Gm42459-201ENSMUST00000199679 742 ntBASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC4.83□□□□□ -1.64
Lsm1Q8VC85 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms