Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Syne4Q8CII8 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Syne4Q8CII8 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Syne4Q8CII8 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.06□□□□□ -1.44
Syne4Q8CII8 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC6.06□□□□□ -1.44
Syne4Q8CII8 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.06□□□□□ -1.44
Syne4Q8CII8 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Syne4Q8CII8 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Syne4Q8CII8 Gm7919-201ENSMUST00000202043 1389 ntBASIC6.06□□□□□ -1.44
Syne4Q8CII8 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC6.06□□□□□ -1.44
Syne4Q8CII8 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC6.06□□□□□ -1.44
Syne4Q8CII8 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm15170-201ENSMUST00000121593 2023 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm14046-201ENSMUST00000119389 509 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm14713-201ENSMUST00000122362 686 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Syne4Q8CII8 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm25278-201ENSMUST00000157267 120 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm6872-201ENSMUST00000165001 700 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm22111-201ENSMUST00000178010 79 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm23687-201ENSMUST00000178664 79 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm24566-201ENSMUST00000179286 79 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm23305-201ENSMUST00000179342 79 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm26389-201ENSMUST00000179819 79 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm22130-201ENSMUST00000179979 79 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm22393-201ENSMUST00000180153 79 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm25085-201ENSMUST00000180298 79 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm28503-201ENSMUST00000185966 147 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm37934-201ENSMUST00000192902 402 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm43629-201ENSMUST00000201782 704 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm44559-201ENSMUST00000207177 1012 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC6.05□□□□□ -1.44
Syne4Q8CII8 AC153975.1-201ENSMUST00000220087 926 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
Syne4Q8CII8 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.05□□□□□ -1.44
Syne4Q8CII8 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Syne4Q8CII8 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Syne4Q8CII8 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Syne4Q8CII8 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Syne4Q8CII8 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Syne4Q8CII8 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Syne4Q8CII8 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Syne4Q8CII8 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.04□□□□□ -1.44
Syne4Q8CII8 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.04□□□□□ -1.44
Syne4Q8CII8 Gm6545-201ENSMUST00000217186 1786 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Syne4Q8CII8 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.04□□□□□ -1.44
Syne4Q8CII8 Gm15297-201ENSMUST00000117795 290 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 Gm12854-201ENSMUST00000128518 297 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Syne4Q8CII8 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.04□□□□□ -1.44
Syne4Q8CII8 Gm16300-201ENSMUST00000160031 1279 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC6.04□□□□□ -1.44
Syne4Q8CII8 Gm6245-201ENSMUST00000164699 768 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 Gm37560-201ENSMUST00000194289 1000 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 Gm36986-201ENSMUST00000195320 353 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC6.04□□□□□ -1.44
Syne4Q8CII8 Gm43093-201ENSMUST00000202439 1213 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 Gm6230-201ENSMUST00000208077 780 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Syne4Q8CII8 AC132104.1-201ENSMUST00000213615 260 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 AC158803.3-201ENSMUST00000220024 211 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 AC154840.1-201ENSMUST00000225216 408 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 CT025525.4-201ENSMUST00000227728 277 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 AC125539.2-202ENSMUST00000227983 587 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 AC125539.2-201ENSMUST00000228339 753 ntBASIC6.04□□□□□ -1.44
Syne4Q8CII8 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.04□□□□□ -1.44
Syne4Q8CII8 Gm7665-201ENSMUST00000076710 297 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms