Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Mir6539-201ENSMUST00000183732 110 ntBASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Gm20819-201ENSMUST00000191091 925 ntBASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Gm19066-201ENSMUST00000193232 1078 ntBASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Gm6543-201ENSMUST00000197353 808 ntBASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Gm38670-201ENSMUST00000199248 77 ntBASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Gm44221-201ENSMUST00000203552 388 ntBASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Gm44307-201ENSMUST00000204466 764 ntBASIC5.86□□□□□ -1.47
Trim9Q8C7M3 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim9Q8C7M3 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Gm18892-201ENSMUST00000217628 881 ntBASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Gm3333-202ENSMUST00000221763 1044 ntBASIC5.86□□□□□ -1.47
Trim9Q8C7M3 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim9Q8C7M3 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 AC122408.2-201ENSMUST00000217901 1391 ntBASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm24350-201ENSMUST00000104163 133 ntBASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm13311-201ENSMUST00000117863 379 ntBASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm8858-201ENSMUST00000118259 342 ntBASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm13367-201ENSMUST00000119955 796 ntBASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm16471-201ENSMUST00000121940 618 ntBASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm27225-201ENSMUST00000183833 557 ntBASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm29356-201ENSMUST00000186935 373 ntBASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm44665-201ENSMUST00000205381 251 ntBASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim9Q8C7M3 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm25595-201ENSMUST00000102273 97 ntBASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm14906-201ENSMUST00000119265 390 ntBASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm25179-201ENSMUST00000122632 128 ntBASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm15878-201ENSMUST00000127561 306 ntBASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm22804-201ENSMUST00000158052 101 ntBASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm24295-201ENSMUST00000158298 131 ntBASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm20401-201ENSMUST00000173717 212 ntBASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.84□□□□□ -1.47
Trim9Q8C7M3 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm27409-201ENSMUST00000184727 80 ntBASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim9Q8C7M3 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms