Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.76□□□□□ -1.49
Ccdc88aQ5SNZ0 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc88aQ5SNZ0 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc88aQ5SNZ0 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc88aQ5SNZ0 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc88aQ5SNZ0 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc88aQ5SNZ0 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Ccdc88aQ5SNZ0 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.76□□□□□ -1.49
Ccdc88aQ5SNZ0 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc88aQ5SNZ0 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.76□□□□□ -1.49
Ccdc88aQ5SNZ0 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm27158-201ENSMUST00000183813 238 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm18426-201ENSMUST00000191874 973 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm17951-201ENSMUST00000198536 496 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm19617-201ENSMUST00000202977 308 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm24170-201ENSMUST00000104124 133 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm12583-201ENSMUST00000120677 853 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm27688-201ENSMUST00000183634 91 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm19131-201ENSMUST00000203408 789 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 AC114573.1-201ENSMUST00000224120 1210 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm44434-201ENSMUST00000203918 3745 ntBASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm14775-201ENSMUST00000122089 310 ntBASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm23069-201ENSMUST00000158240 311 ntBASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Ighv10-4-201ENSMUST00000193702 299 ntBASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm26330-201ENSMUST00000082817 104 ntBASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC5.74□□□□□ -1.49
Ccdc88aQ5SNZ0 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm11313-201ENSMUST00000118779 432 ntBASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm5558-201ENSMUST00000178933 495 ntBASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm15772-201ENSMUST00000118533 438 ntBASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ccdc88aQ5SNZ0 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms