Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.83□□□□□ -1.64
Trim63Q38HM4 AC133203.2-201ENSMUST00000226709 464 ntBASIC4.83□□□□□ -1.64
Trim63Q38HM4 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim63Q38HM4 AW822073-201ENSMUST00000075305 555 ntBASIC4.83□□□□□ -1.64
Trim63Q38HM4 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim63Q38HM4 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim63Q38HM4 n-R5s180-201ENSMUST00000082770 106 ntBASIC4.83□□□□□ -1.64
Trim63Q38HM4 n-R5s156-201ENSMUST00000083377 105 ntBASIC4.83□□□□□ -1.64
Trim63Q38HM4 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim63Q38HM4 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim63Q38HM4 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim63Q38HM4 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim63Q38HM4 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim63Q38HM4 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.83□□□□□ -1.64
Trim63Q38HM4 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim63Q38HM4 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim63Q38HM4 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim63Q38HM4 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim63Q38HM4 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
Trim63Q38HM4 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC4.83□□□□□ -1.64
Trim63Q38HM4 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim63Q38HM4 Gm9496-201ENSMUST00000191295 1601 ntBASIC4.83□□□□□ -1.64
Trim63Q38HM4 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Trim63Q38HM4 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm18879-201ENSMUST00000221187 1537 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm20679-201ENSMUST00000177285 1402 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm23748-201ENSMUST00000104227 131 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm14932-201ENSMUST00000117112 453 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm15149-201ENSMUST00000119370 360 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm12495-201ENSMUST00000119750 447 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm7746-201ENSMUST00000120966 503 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm17212-201ENSMUST00000166666 259 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm27342-201ENSMUST00000183530 109 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Mir6972-201ENSMUST00000184774 64 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm27458-201ENSMUST00000185108 121 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm20813-201ENSMUST00000186646 705 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm21617-201ENSMUST00000188297 691 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm37272-201ENSMUST00000193401 488 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm6064-201ENSMUST00000203999 454 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm44092-201ENSMUST00000204470 258 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm18838-201ENSMUST00000204855 886 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm2221-201ENSMUST00000209342 418 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC4.82□□□□□ -1.64
Trim63Q38HM4 AC131710.2-201ENSMUST00000226773 683 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 AC158981.3-201ENSMUST00000226844 1024 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 AC161383.1-201ENSMUST00000227356 527 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 CT025630.2-201ENSMUST00000228293 487 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm43462-201ENSMUST00000200265 3648 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm43210-201ENSMUST00000196743 6152 ntBASIC4.82□□□□□ -1.64
Trim63Q38HM4 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim63Q38HM4 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim63Q38HM4 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim63Q38HM4 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim63Q38HM4 Gm37936-201ENSMUST00000194647 1322 ntBASIC4.81□□□□□ -1.64
Trim63Q38HM4 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim63Q38HM4 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim63Q38HM4 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim63Q38HM4 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim63Q38HM4 Gm12245-201ENSMUST00000117266 357 ntBASIC4.81□□□□□ -1.64
Trim63Q38HM4 Gm11975-201ENSMUST00000118772 481 ntBASIC4.81□□□□□ -1.64
Trim63Q38HM4 Gm14580-201ENSMUST00000119122 718 ntBASIC4.81□□□□□ -1.64
Trim63Q38HM4 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC4.81□□□□□ -1.64
Trim63Q38HM4 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.81□□□□□ -1.64
Trim63Q38HM4 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim63Q38HM4 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms