Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Msx2Q03358 Gm23077-201ENSMUST00000157854 116 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm25434-201ENSMUST00000158278 167 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm22434-201ENSMUST00000158549 122 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm9587-201ENSMUST00000172449 454 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm6155-201ENSMUST00000173735 341 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm22258-201ENSMUST00000177645 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm26502-201ENSMUST00000177732 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Snord116l13-201ENSMUST00000177737 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm25350-201ENSMUST00000177849 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Snord116l15-201ENSMUST00000177940 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm23446-201ENSMUST00000177977 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Snord116l4-201ENSMUST00000177982 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm26201-201ENSMUST00000178047 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm24711-201ENSMUST00000178062 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm24609-201ENSMUST00000178166 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm23265-201ENSMUST00000178321 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm22812-201ENSMUST00000178329 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Snord116l3-201ENSMUST00000178370 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm26246-201ENSMUST00000178388 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm22131-201ENSMUST00000178415 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm25155-201ENSMUST00000178450 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm24760-201ENSMUST00000178530 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm26032-201ENSMUST00000178535 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm22285-201ENSMUST00000178576 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm22776-201ENSMUST00000178634 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm22417-201ENSMUST00000178656 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Snord116l2-201ENSMUST00000178675 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm26270-201ENSMUST00000178690 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Snord116l16-201ENSMUST00000178777 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm25074-201ENSMUST00000178782 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm25210-201ENSMUST00000178813 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm25157-201ENSMUST00000178914 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm23313-201ENSMUST00000178931 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Snord116l17-201ENSMUST00000178936 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm23089-201ENSMUST00000178947 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm22046-201ENSMUST00000179027 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Snord116l10-201ENSMUST00000179053 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm26365-201ENSMUST00000179177 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm23767-201ENSMUST00000179278 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm24153-201ENSMUST00000179280 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm25597-201ENSMUST00000179388 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Snord116l1-201ENSMUST00000179518 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm22941-201ENSMUST00000179630 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm22631-201ENSMUST00000179656 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm25816-201ENSMUST00000179764 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Snord116l12-201ENSMUST00000179816 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Snord116l14-201ENSMUST00000179875 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Snord116l8-201ENSMUST00000179889 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Snord116l7-201ENSMUST00000179895 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Snord116l5-201ENSMUST00000179927 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Snord116l6-201ENSMUST00000179955 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm26188-201ENSMUST00000179963 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm25471-201ENSMUST00000180126 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm26433-201ENSMUST00000180227 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Snord116l11-201ENSMUST00000180312 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm23862-201ENSMUST00000180342 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm22128-201ENSMUST00000180346 94 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm27193-201ENSMUST00000184217 586 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm28023-201ENSMUST00000184556 60 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm27825-201ENSMUST00000184586 60 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm27299-201ENSMUST00000184593 103 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Msx2Q03358 Gm18698-201ENSMUST00000192327 668 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm43546-201ENSMUST00000196721 943 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Msx2Q03358 Gm19089-201ENSMUST00000197207 613 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm42713-201ENSMUST00000202709 945 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm45136-201ENSMUST00000205793 943 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 AC161520.1-201ENSMUST00000210954 939 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Msx2Q03358 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.93□□□□□ -1.46
Msx2Q03358 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.93□□□□□ -1.46
Msx2Q03358 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.93□□□□□ -1.46
Msx2Q03358 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC5.93□□□□□ -1.46
Msx2Q03358 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC5.93□□□□□ -1.46
Msx2Q03358 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Msx2Q03358 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Msx2Q03358 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Msx2Q03358 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Msx2Q03358 Mir106b-201ENSMUST00000083580 82 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Msx2Q03358 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Msx2Q03358 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Msx2Q03358 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Msx2Q03358 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.93□□□□□ -1.46
Msx2Q03358 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Msx2Q03358 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC5.93□□□□□ -1.46
Msx2Q03358 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Msx2Q03358 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Msx2Q03358 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Msx2Q03358 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.92□□□□□ -1.46
Msx2Q03358 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.92□□□□□ -1.46
Msx2Q03358 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Msx2Q03358 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms