Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Sox1P53783 Gm25758-201ENSMUST00000103987 129 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Sox1P53783 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox1P53783 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Gm14173-201ENSMUST00000117690 278 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Gm8692-201ENSMUST00000118102 438 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Gm14881-201ENSMUST00000120366 372 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Sox1P53783 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC6.46□□□□□ -1.38
Sox1P53783 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Sox1P53783 Gm9593-201ENSMUST00000166034 469 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox1P53783 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox1P53783 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox1P53783 Gm18522-201ENSMUST00000173947 650 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox1P53783 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Sox1P53783 Mir6343-201ENSMUST00000183584 84 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Sox1P53783 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Gm37095-201ENSMUST00000195421 205 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Gm7626-201ENSMUST00000195801 353 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.46□□□□□ -1.38
Sox1P53783 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC6.46□□□□□ -1.38
Sox1P53783 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC6.46□□□□□ -1.38
Sox1P53783 Gm7624-201ENSMUST00000209702 435 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Gm45246-201ENSMUST00000210820 367 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Gm8106-201ENSMUST00000213123 523 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Sox1P53783 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.46□□□□□ -1.38
Sox1P53783 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.46□□□□□ -1.38
Sox1P53783 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.46□□□□□ -1.38
Sox1P53783 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.46□□□□□ -1.38
Sox1P53783 CT030182.2-201ENSMUST00000223569 620 ntBASIC6.46□□□□□ -1.38
Sox1P53783 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.46□□□□□ -1.38
Sox1P53783 AC123665.4-201ENSMUST00000228790 249 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Gm12582-201ENSMUST00000030555 697 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Sox1P53783 Gm5229-201ENSMUST00000039375 354 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Sox1P53783 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Sox1P53783 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Sox1P53783 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Sox1P53783 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Sox1P53783 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox1P53783 Gm23614-201ENSMUST00000082598 107 ntBASIC6.46□□□□□ -1.38
Sox1P53783 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC6.46□□□□□ -1.38
Sox1P53783 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Sox1P53783 Gm43921-201ENSMUST00000204296 1792 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.46□□□□□ -1.38
Sox1P53783 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Sox1P53783 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Sox1P53783 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox1P53783 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sox1P53783 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Sox1P53783 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Sox1P53783 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Sox1P53783 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Sox1P53783 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Sox1P53783 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Sox1P53783 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.45□□□□□ -1.38
Sox1P53783 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Sox1P53783 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Sox1P53783 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Sox1P53783 Gm45221-201ENSMUST00000207822 2272 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Sox1P53783 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Sox1P53783 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
Sox1P53783 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Sox1P53783 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.45□□□□□ -1.38
Sox1P53783 Gm14870-201ENSMUST00000118414 156 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Gm14294-201ENSMUST00000119749 751 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Gm12837-201ENSMUST00000120131 373 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Gm16445-201ENSMUST00000120399 714 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Gm5646-201ENSMUST00000120568 714 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Gm8545-201ENSMUST00000120692 801 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Gm14986-201ENSMUST00000121262 1002 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Gm24910-201ENSMUST00000157289 272 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Gm23032-201ENSMUST00000157995 107 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Gm22945-201ENSMUST00000158557 157 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Sox1P53783 Gm8221-201ENSMUST00000178052 564 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Gm15143-201ENSMUST00000178180 714 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Gm27599-201ENSMUST00000183758 174 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Gm27957-201ENSMUST00000184054 127 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Gm38075-201ENSMUST00000191979 920 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Trbv24-201ENSMUST00000194614 347 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.45□□□□□ -1.38
Sox1P53783 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms