Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm25264-201ENSMUST00000158519 117 ntBASIC5.02□□□□□ -1.61
HttP42859 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.02□□□□□ -1.61
HttP42859 Gm27037-201ENSMUST00000182270 960 ntBASIC5.02□□□□□ -1.61
HttP42859 Gm45156-201ENSMUST00000207255 439 ntBASIC5.02□□□□□ -1.61
HttP42859 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HttP42859 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.02□□□□□ -1.61
HttP42859 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC5.02□□□□□ -1.61
HttP42859 Gnrh1-202ENSMUST00000223929 428 ntBASIC5.02□□□□□ -1.61
HttP42859 Vmn1r89-206ENSMUST00000227319 985 ntBASIC5.02□□□□□ -1.61
HttP42859 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HttP42859 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
HttP42859 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HttP42859 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 Gm26140-201ENSMUST00000103807 110 ntBASIC5.01□□□□□ -1.61
HttP42859 Gm14560-201ENSMUST00000118672 375 ntBASIC5.01□□□□□ -1.61
HttP42859 Gm15364-201ENSMUST00000119618 585 ntBASIC5.01□□□□□ -1.61
HttP42859 Gm13162-201ENSMUST00000121481 454 ntBASIC5.01□□□□□ -1.61
HttP42859 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.01□□□□□ -1.61
HttP42859 AC156504.1-201ENSMUST00000214608 157 ntBASIC5.01□□□□□ -1.61
HttP42859 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC5.01□□□□□ -1.61
HttP42859 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HttP42859 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 9530053A07Rik-204ENSMUST00000150948 7895 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HttP42859 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 AC153143.1-201ENSMUST00000222966 1340 ntBASIC5.01□□□□□ -1.61
HttP42859 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HttP42859 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HttP42859 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
HttP42859 AW046200-203ENSMUST00000211787 2479 ntBASIC5.01□□□□□ -1.61
HttP42859 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HttP42859 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.01□□□□□ -1.61
HttP42859 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HttP42859 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HttP42859 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HttP42859 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HttP42859 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HttP42859 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
HttP42859 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HttP42859 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
HttP42859 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
HttP42859 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 Defa-ps5-201ENSMUST00000121541 279 ntBASIC5.01□□□□□ -1.61
HttP42859 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.01□□□□□ -1.61
HttP42859 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HttP42859 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.01□□□□□ -1.61
HttP42859 Mir6905-201ENSMUST00000184228 70 ntBASIC5.01□□□□□ -1.61
HttP42859 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.01□□□□□ -1.61
HttP42859 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HttP42859 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HttP42859 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HttP42859 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5□□□□□ -1.61
HttP42859 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC5□□□□□ -1.61
HttP42859 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5□□□□□ -1.61
HttP42859 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HttP42859 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HttP42859 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5□□□□□ -1.61
HttP42859 Gm37023-201ENSMUST00000192895 2426 ntBASIC5□□□□□ -1.61
HttP42859 Gm23945-201ENSMUST00000179609 92 ntBASIC5□□□□□ -1.61
HttP42859 Gm8939-201ENSMUST00000192577 964 ntBASIC5□□□□□ -1.61
HttP42859 Gm17781-201ENSMUST00000195232 649 ntBASIC5□□□□□ -1.61
HttP42859 AC153852.1-201ENSMUST00000217881 567 ntBASIC5□□□□□ -1.61
HttP42859 Gm3213-201ENSMUST00000219296 441 ntBASIC5□□□□□ -1.61
HttP42859 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HttP42859 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
HttP42859 Gm29730-201ENSMUST00000192986 1396 ntBASIC5□□□□□ -1.61
HttP42859 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5□□□□□ -1.61
HttP42859 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5□□□□□ -1.61
HttP42859 Gm31258-201ENSMUST00000194532 3297 ntBASIC5□□□□□ -1.61
HttP42859 Gm26814-201ENSMUST00000181178 4149 ntBASIC5□□□□□ -1.61
HttP42859 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HttP42859 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HttP42859 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
HttP42859 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC5□□□□□ -1.61
HttP42859 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5□□□□□ -1.61
HttP42859 Gm20796-201ENSMUST00000180355 5838 ntBASIC5□□□□□ -1.61
HttP42859 Ints2-201ENSMUST00000018212 5906 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HttP42859 Gm11409-201ENSMUST00000118621 403 ntBASIC5□□□□□ -1.61
HttP42859 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5□□□□□ -1.61
HttP42859 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5□□□□□ -1.61
HttP42859 Gm15534-201ENSMUST00000137642 562 ntBASIC5□□□□□ -1.61
HttP42859 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5□□□□□ -1.61
HttP42859 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC5□□□□□ -1.61
HttP42859 Gm7786-201ENSMUST00000210494 436 ntBASIC5□□□□□ -1.61
HttP42859 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5□□□□□ -1.61
HttP42859 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HttP42859 Gm43386-201ENSMUST00000199654 4001 ntBASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms