Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Gjb1P28230 AC151904.4-201ENSMUST00000219868 1319 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Gjb1P28230 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
Gjb1P28230 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Gjb1P28230 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Gjb1P28230 Gm25096-201ENSMUST00000104043 129 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 Gm8569-201ENSMUST00000117630 647 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm15297-201ENSMUST00000117795 290 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm15090-201ENSMUST00000118787 1196 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm14874-201ENSMUST00000118995 438 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm13924-201ENSMUST00000119899 486 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm15089-201ENSMUST00000122332 1196 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm25176-201ENSMUST00000122640 125 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC6.04□□□□□ -1.44
Gjb1P28230 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 Gm3362-201ENSMUST00000148102 466 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 Gm16114-201ENSMUST00000161930 300 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Gjb1P28230 Gm27044-201ENSMUST00000183033 796 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 Gm8458-201ENSMUST00000196658 819 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm9278-201ENSMUST00000205508 553 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC6.04□□□□□ -1.44
Gjb1P28230 Gm18924-201ENSMUST00000211929 316 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC6.04□□□□□ -1.44
Gjb1P28230 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm8264-201ENSMUST00000217801 465 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm8158-201ENSMUST00000219220 465 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm8112-201ENSMUST00000219637 465 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC6.04□□□□□ -1.44
Gjb1P28230 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 CT030662.3-201ENSMUST00000228751 476 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm23972-201ENSMUST00000083322 165 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Gjb1P28230 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Gjb1P28230 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Gm44668-201ENSMUST00000207911 3265 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Gjb1P28230 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 AC153494.1-201ENSMUST00000218664 3041 ntBASIC6.04□□□□□ -1.44
Gjb1P28230 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gjb1P28230 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Gjb1P28230 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Gjb1P28230 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Gjb1P28230 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Gjb1P28230 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Gjb1P28230 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Gjb1P28230 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Gjb1P28230 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Gjb1P28230 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Gjb1P28230 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Gjb1P28230 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Gjb1P28230 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 Gm25102-201ENSMUST00000122479 112 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Gjb1P28230 Gm15905-201ENSMUST00000137042 298 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 Gm24188-201ENSMUST00000157980 108 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 Gm16300-201ENSMUST00000160031 1279 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Gjb1P28230 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 Gm21909-201ENSMUST00000178260 439 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 Gm4845-201ENSMUST00000179202 562 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 Gm26925-201ENSMUST00000182470 957 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC6.03□□□□□ -1.44
Gjb1P28230 Gm28116-201ENSMUST00000189064 387 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Gjb1P28230 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 Gm18553-201ENSMUST00000194152 634 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Gjb1P28230 Gm18611-201ENSMUST00000200334 1118 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 Gm18255-201ENSMUST00000211316 765 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC6.03□□□□□ -1.44
Gjb1P28230 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Gjb1P28230 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.03□□□□□ -1.44
Gjb1P28230 AC132833.3-201ENSMUST00000227472 866 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 AC156574.2-201ENSMUST00000228023 282 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 AC130673.2-201ENSMUST00000228091 797 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 Desi2-202ENSMUST00000069568 1193 ntBASIC6.03□□□□□ -1.44
Gjb1P28230 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Gjb1P28230 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Gjb1P28230 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Gjb1P28230 Gm22456-201ENSMUST00000082578 125 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 149.4 ms