Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.79□□□□□ -1.48
Col1a1P11087 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col1a1P11087 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC5.79□□□□□ -1.48
Col1a1P11087 Gm23928-201ENSMUST00000082469 145 ntBASIC5.79□□□□□ -1.48
Col1a1P11087 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col1a1P11087 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col1a1P11087 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Col1a1P11087 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col1a1P11087 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.79□□□□□ -1.48
Col1a1P11087 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col1a1P11087 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col1a1P11087 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col1a1P11087 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.79□□□□□ -1.48
Col1a1P11087 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.78□□□□□ -1.48
Col1a1P11087 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Col1a1P11087 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col1a1P11087 AC139754.2-201ENSMUST00000218037 1455 ntBASIC5.78□□□□□ -1.48
Col1a1P11087 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col1a1P11087 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col1a1P11087 Gm14933-201ENSMUST00000118840 481 ntBASIC5.78□□□□□ -1.48
Col1a1P11087 Gm16106-201ENSMUST00000119187 294 ntBASIC5.78□□□□□ -1.48
Col1a1P11087 Gm13815-201ENSMUST00000119963 412 ntBASIC5.78□□□□□ -1.48
Col1a1P11087 Gm14831-201ENSMUST00000120253 409 ntBASIC5.78□□□□□ -1.48
Col1a1P11087 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC5.78□□□□□ -1.48
Col1a1P11087 Gm23465-201ENSMUST00000157134 262 ntBASIC5.78□□□□□ -1.48
Col1a1P11087 Mir6414-201ENSMUST00000183685 82 ntBASIC5.78□□□□□ -1.48
Col1a1P11087 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.78□□□□□ -1.48
Col1a1P11087 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.78□□□□□ -1.48
Col1a1P11087 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col1a1P11087 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.78□□□□□ -1.48
Col1a1P11087 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.78□□□□□ -1.48
Col1a1P11087 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.78□□□□□ -1.48
Col1a1P11087 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col1a1P11087 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col1a1P11087 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.78□□□□□ -1.48
Col1a1P11087 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col1a1P11087 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Col1a1P11087 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Col1a1P11087 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col1a1P11087 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col1a1P11087 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col1a1P11087 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col1a1P11087 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Col1a1P11087 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col1a1P11087 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.78□□□□□ -1.48
Col1a1P11087 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col1a1P11087 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Col1a1P11087 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col1a1P11087 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col1a1P11087 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.78□□□□□ -1.48
Col1a1P11087 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Col1a1P11087 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Gm22758-201ENSMUST00000102275 96 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Gm23273-201ENSMUST00000104058 135 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Gm14610-201ENSMUST00000118358 966 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm18426-201ENSMUST00000191874 973 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Gm9317-201ENSMUST00000197055 862 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.77□□□□□ -1.49
Col1a1P11087 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm24166-201ENSMUST00000082724 135 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col1a1P11087 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col1a1P11087 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col1a1P11087 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Col1a1P11087 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col1a1P11087 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
Col1a1P11087 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col1a1P11087 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col1a1P11087 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.77□□□□□ -1.49
Col1a1P11087 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Gm14082-201ENSMUST00000118582 801 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Gm16463-201ENSMUST00000120527 721 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Gm12752-201ENSMUST00000121657 811 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Gm24251-201ENSMUST00000157324 114 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Gm25224-201ENSMUST00000158195 68 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Gm24931-201ENSMUST00000158324 107 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Gm16107-201ENSMUST00000162523 862 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 Gm38221-201ENSMUST00000195146 365 ntBASIC5.77□□□□□ -1.49
Col1a1P11087 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms