| Hoxa9 | P09631 | Ceacam5-201 | ENSMUST00000081907 | 3273 nt | APPRIS P1 TSL 1 (best) BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Galnt1-208 | ENSMUST00000178605 | 3796 nt | APPRIS P1 TSL 1 (best) BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | CT009733.2-202 | ENSMUST00000224171 | 4748 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Eif3s6-ps1-201 | ENSMUST00000117907 | 470 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm14930-201 | ENSMUST00000118864 | 652 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm12413-201 | ENSMUST00000121508 | 312 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm21990-201 | ENSMUST00000124692 | 383 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | 9030622O22Rik-201 | ENSMUST00000129082 | 1245 nt | TSL 1 (best) BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm26153-201 | ENSMUST00000157433 | 127 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | B230216N24Rik-204 | ENSMUST00000161661 | 719 nt | TSL 2 BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm27762-201 | ENSMUST00000183417 | 109 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Mir6963-201 | ENSMUST00000183535 | 71 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm28503-201 | ENSMUST00000185966 | 147 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm28468-201 | ENSMUST00000188536 | 615 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm19086-201 | ENSMUST00000190772 | 665 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm37073-201 | ENSMUST00000192469 | 1222 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm10048-201 | ENSMUST00000194196 | 372 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm18864-201 | ENSMUST00000194518 | 1051 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm31510-202 | ENSMUST00000206795 | 239 nt | TSL 3 BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm44919-201 | ENSMUST00000208587 | 1073 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | AC123064.2-201 | ENSMUST00000217758 | 193 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | AC164624.1-201 | ENSMUST00000219148 | 1025 nt | TSL 5 BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | AC158633.1-201 | ENSMUST00000219892 | 649 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | AC155236.1-201 | ENSMUST00000220591 | 923 nt | TSL 5 BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | CT954323.2-201 | ENSMUST00000222056 | 213 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Ap3m1-208 | ENSMUST00000224016 | 764 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Rnase9-201 | ENSMUST00000064214 | 1189 nt | APPRIS P1 TSL 1 (best) BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Vmn2r-ps56-201 | ENSMUST00000174814 | 2596 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Mmp8-201 | ENSMUST00000018765 | 2425 nt | APPRIS P1 TSL 1 (best) BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Olfr107-204 | ENSMUST00000215974 | 2282 nt | APPRIS P1 TSL 5 BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Cnot4-207 | ENSMUST00000202417 | 3296 nt | TSL 1 (best) BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Mdn1-211 | ENSMUST00000178134 | 17959 nt | APPRIS P2 TSL 5 BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Glb1l3-201 | ENSMUST00000034448 | 2468 nt | APPRIS ALT2 TSL 5 BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Olfr518-202 | ENSMUST00000217803 | 2994 nt | APPRIS P1 TSL 5 BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | D7Ertd443e-202 | ENSMUST00000106129 | 1306 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm3696-201 | ENSMUST00000167923 | 1814 nt | APPRIS P1 TSL 5 BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Akr1c14-202 | ENSMUST00000118717 | 3183 nt | APPRIS P1 TSL 5 BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm3978-201 | ENSMUST00000163406 | 2512 nt | BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Inpp4b-203 | ENSMUST00000109852 | 4095 nt | APPRIS ALT2 TSL 5 BASIC | 5.18 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm6503-201 | ENSMUST00000210829 | 2225 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | 4930532I03Rik-201 | ENSMUST00000218463 | 1724 nt | TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | 9830107B12Rik-201 | ENSMUST00000063481 | 3639 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Cd33-203 | ENSMUST00000205503 | 5728 nt | APPRIS P3 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm43027-201 | ENSMUST00000202906 | 3691 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm28183-201 | ENSMUST00000191321 | 1406 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Ctsj-202 | ENSMUST00000224224 | 1421 nt | APPRIS ALT2 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm14569-204 | ENSMUST00000169499 | 5181 nt | APPRIS P1 TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Slc5a3-201 | ENSMUST00000113975 | 10913 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Trav2-201 | ENSMUST00000103568 | 325 nt | APPRIS ALT2 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Trav5-1-201 | ENSMUST00000103570 | 343 nt | APPRIS P1 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm13033-201 | ENSMUST00000117591 | 1057 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm14985-201 | ENSMUST00000118693 | 786 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm14716-201 | ENSMUST00000120138 | 718 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm11381-201 | ENSMUST00000138574 | 420 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm27202-201 | ENSMUST00000183838 | 512 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Mir7031-201 | ENSMUST00000183860 | 65 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Mrgprc1-ps-201 | ENSMUST00000185552 | 952 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | 1700016P04Rik-201 | ENSMUST00000186770 | 429 nt | TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm18342-201 | ENSMUST00000186987 | 694 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm2427-201 | ENSMUST00000189121 | 881 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm42458-201 | ENSMUST00000201914 | 369 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm44412-201 | ENSMUST00000203018 | 294 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | 1700126G02Rik-201 | ENSMUST00000204351 | 725 nt | TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm44515-201 | ENSMUST00000209045 | 379 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm3912-203 | ENSMUST00000211024 | 367 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Kcnj1-203 | ENSMUST00000213393 | 1277 nt | APPRIS P1 TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm31698-202 | ENSMUST00000214385 | 527 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | AC154305.3-201 | ENSMUST00000224661 | 552 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Olfr720-201 | ENSMUST00000035250 | 1023 nt | APPRIS P1 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Olfr866-201 | ENSMUST00000062248 | 1077 nt | APPRIS P1 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Ang5-201 | ENSMUST00000066719 | 700 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Xlr5c-201 | ENSMUST00000088450 | 540 nt | TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Mir199a-2-201 | ENSMUST00000093618 | 110 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | R3hdm1-201 | ENSMUST00000036288 | 4795 nt | APPRIS P2 TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm5925-201 | ENSMUST00000105016 | 1497 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm35842-201 | ENSMUST00000207859 | 4464 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | 1700019J19Rik-202 | ENSMUST00000213583 | 1856 nt | TSL 5 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm37456-201 | ENSMUST00000193176 | 5837 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm37890-201 | ENSMUST00000195610 | 3992 nt | BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Tinag-201 | ENSMUST00000034911 | 1726 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Clec9a-201 | ENSMUST00000058352 | 3293 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | D030025E07Rik-203 | ENSMUST00000197413 | 2346 nt | TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Kcnj2-201 | ENSMUST00000042970 | 5444 nt | APPRIS P1 TSL 1 (best) BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Olfr2-206 | ENSMUST00000216375 | 5828 nt | APPRIS P1 TSL 3 BASIC | 5.17 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Vmn1r173-203 | ENSMUST00000227987 | 9233 nt | APPRIS P1 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | 1700091H14Rik-202 | ENSMUST00000185725 | 1388 nt | TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | AC144772.1-201 | ENSMUST00000226372 | 2398 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Zfp950-207 | ENSMUST00000180544 | 2568 nt | APPRIS P1 TSL 3 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Herc2-202 | ENSMUST00000164095 | 15261 nt | APPRIS P2 TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Zscan4-ps2-201 | ENSMUST00000091440 | 2277 nt | APPRIS P1 TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Nlrp9b-201 | ENSMUST00000073151 | 3346 nt | APPRIS P1 TSL 1 (best) BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm43283-201 | ENSMUST00000199138 | 2548 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Tcrg-C2-201 | ENSMUST00000103561 | 914 nt | APPRIS P1 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm22899-201 | ENSMUST00000104540 | 131 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Mup6-201 | ENSMUST00000107517 | 926 nt | APPRIS P1 TSL 5 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm13452-201 | ENSMUST00000120896 | 1097 nt | BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Rrm2b-203 | ENSMUST00000137636 | 900 nt | TSL 5 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm15868-201 | ENSMUST00000144291 | 520 nt | TSL 5 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm14223-201 | ENSMUST00000146060 | 517 nt | TSL 3 BASIC | 5.16 | □□□□□ -1.58 | | |
| Hoxa9 | P09631 | Gm25846-201 | ENSMUST00000158013 | 135 nt | BASIC | 5.16 | □□□□□ -1.58 | | |